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See other SLC11A1 GE Assays ›
Gene Symbol:
Slc11a1
Gene Name:
solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1
Gene Aliases:
Bcg, Itg, Lsh, Nramp1
Chromosome Location:
Chr.9: 81655610 - 81666697 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn02113992_u1
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Catalog # 4331182
Price 244.00
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Slc11a1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001031658.1 NP_001026828.1 9 952 163
XM_006245219.2 XP_006245281.1 10 1030 163
XM_006245220.1 XP_006245282.1 10 1078 163
GenBank mRNA BC100653.1 - 9 952 7932285 163

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900000898.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Transporter 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Amplicon spans exons and probe does not span exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Slc11a1

Panther Classification:

Molecular Function -

secondary carrier transporter

Gene Ontology Categories:

Function(s) Process(es)

protein import into nucleus, translocation
negative regulation of cytokine production
positive regulation of cytokine production
T cell proliferation involved in immune response
T cell cytokine production
positive regulation of dendritic cell antigen processing and presentation
positive regulation of T-helper 1 type immune response
ion transport
iron ion transport
manganese ion transport
cellular cadmium ion homeostasis
cellular iron ion homeostasis
phagocytosis
inflammatory response
vacuolar acidification
biological_process
response to bacterium
positive regulation of gene expression
nitrite transport
activation of protein kinase activity
response to lipopolysaccharide
interleukin-2 production
interleukin-3 production
positive regulation of interferon-gamma production
response to interferon-gamma
wound healing
macrophage activation
defense response to bacterium
defense response to protozoan
L-arginine import
MHC class II biosynthetic process
respiratory burst
positive regulation of transcription from RNA polymerase II promoter
antigen processing and presentation of peptide antigen
mRNA stabilization
positive regulation of phagocytosis
defense response to Gram-negative bacterium
iron ion homeostasis
multicellular organismal iron ion homeostasis
cadmium ion transmembrane transport
divalent metal ion export
manganese ion transmembrane transport
molecular_function
transporter activity
manganese ion transmembrane transporter activity
protein homodimerization activity
transition metal ion transmembrane transporter activity
metal ion:proton antiporter activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR0900007377.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007374.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007384.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007385.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007378.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007368.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007373.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007376.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007370.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007382.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007375.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007383.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007386.rn.1 TC0900000898.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900007366.rn.1 TC0900000898.rn.1 RTA TC

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