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See other TARBP2 GE Assays ›
Gene Symbol:
Tarbp2
Gene Name:
TAR (HIV-1) RNA binding protein 2
Gene Aliases:
-
Chromosome Location:
Chr.7: 144121731 - 144126860 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01532664_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tarbp2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001034941.1 NP_001030113.1 7 - 8 845 125
XM_006242428.2 XP_006242490.1 7 - 8 925 125
XM_006242429.2 XP_006242491.1 6 - 7 738 125
XM_006242430.2 XP_006242492.1 5 - 6 583 125
GenBank mRNA BC104690.1 - 7 - 8 845 7107060 125

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001905.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tarbp2

Gene Ontology Categories:

Function(s) Process(es)

regulation of translation
spermatid development
single fertilization
biological_process
production of siRNA involved in RNA interference
targeting of mRNA for destruction involved in RNA interference
pre-miRNA processing
multicellular organism growth
miRNA loading onto RISC involved in gene silencing by miRNA
positive regulation of viral genome replication
positive regulation of translation
regulation of viral transcription
negative regulation of defense response to virus by host
molecular_function
double-stranded RNA binding
siRNA binding
miRNA binding
protein homodimerization activity
pre-miRNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P589680 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P589680 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P589680 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P589680 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P589680 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10940463 - -
Affymetrix Rat Gene 1.0 ST Array 10914613 - -
Affymetrix Rat Gene 1.1 ST Array 10940463 - -
Affymetrix Rat Gene 1.1 ST Array 10914612 - -
Rat Genome 230 2.0 Array 1372962_at - -
Rat Genome 230 2.0 Array 1372962_PM_at - -
Affymetrix HT Rat Focus Array 1372962_PM_at - -
Affymetrix HT Rat Focus Array 1372962_at - -
Affymetrix Rat Clariom S Assay PSR0700015006.rn.1 TC0700001905.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0700015007.rn.1 TC0700001905.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0700015008.rn.1 TC0700001905.rn.1 RTA TC
Rat Expression Set 230 1372962_PM_at - -
Rat Expression Set 230 1372962_at - -
Affymetrix Rat Gene 1.0 ST Array 10940463 - -
Affymetrix Rat Gene 1.0 ST Array 10914612 - -
Rat Genome U34 Set rc_AA955857_f_at - -
Rat Genome U34 Set rc_AA955857_i_at - -
Rat Genome U34 Set AA851121_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21384021 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1370539 - -

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