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Gene Symbol:
Nfkbia
Gene Name:
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
Gene Aliases:
RL/IF-1
Chromosome Location:
Chr.6: 76267227 - 76270457 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01473657_g1
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Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Nfkbia
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001105720.2 NP_001099190.2 1 - 2 344 71
GenBank mRNA BC166886.1 - 1 - 2 296 6890357 71
CB316505.1 - 1 - 2 298 71
FQ215246.1 - 1 - 2 296 71
FQ225877.1 - 1 - 2 294 71
FQ226288.1 - 1 - 2 294 71
FQ227283.1 - 1 - 2 294 71
FQ233200.1 - 1 - 2 294 71
FQ233557.1 - 1 - 2 296 71
FQ233627.1 - 1 - 2 282 71
FQ234262.1 - 1 - 2 296 71
X63594.1 - 1 - 2 274 71

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002478.rn.1

Set Membership:

Amplicon length between 71 and 85 Apoptosis Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

protein import into nucleus, translocation
cytoplasmic sequestering of NF-kappaB
regulation of gene expression
negative regulation of macrophage derived foam cell differentiation
positive regulation of cholesterol efflux
negative regulation of lipid storage
lipopolysaccharide-mediated signaling pathway
negative regulation of NF-kappaB transcription factor activity
positive regulation of cellular protein metabolic process
response to muramyl dipeptide
response to lipopolysaccharide
toll-like receptor 4 signaling pathway
response to muscle stretch
regulation of cell proliferation
cytoplasmic sequestering of transcription factor
response to exogenous dsRNA
negative regulation of myeloid cell differentiation
negative regulation of Notch signaling pathway
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
nucleotide-binding oligomerization domain containing 1 signaling pathway
nucleotide-binding oligomerization domain containing 2 signaling pathway
nuclear localization sequence binding
enzyme binding
heat shock protein binding
ubiquitin protein ligase binding
protein complex binding
identical protein binding
NF-kappaB binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR0600017686.rn.1 TC0600002478.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0600017689.rn.1 TC0600002478.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0600017685.rn.1 TC0600002478.rn.1 RTA TC

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