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Gene Symbol:
Ptgs1
Gene Name:
prostaglandin-endoperoxide synthase 1
Gene Aliases:
Cox-1, Cox-3, Cox1, Cox3, Pghs-1
Chromosome Location:
Chr.3: 15560685 - 15582339 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00566881_m1
Best Coverage
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ptgs1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_017043.4 NP_058739.4 9 - 10 1364 85
XM_006234063.2 XP_006234125.1 9 - 10 1363 85
GenBank mRNA BC081816.1 - 9 - 10 1364 7129759 85
S67721.1 - 9 - 10 1357 85
U03388.1 - 9 - 10 1357 85
U18060.1 - 8 - 9 1305 85

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300000322.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus Rat Inflammation 1700 Inventoried Rat_Inflammation Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ptgs1

Panther Classification:

Molecular Function -

oxygenase

Gene Ontology Categories:

Function(s) Process(es)

prostaglandin biosynthetic process
prostaglandin metabolic process
inflammatory response
response to oxidative stress
aging
learning
memory
regulation of blood pressure
response to organonitrogen compound
negative regulation of norepinephrine secretion
sensory perception of pain
cyclooxygenase pathway
negative regulation of epinephrine secretion
maintenance of blood-brain barrier
regulation of cell proliferation
positive regulation of vasoconstriction
positive regulation of smooth muscle contraction
response to corticosterone
oxidation-reduction process
response to fatty acid
peroxidase activity
prostaglandin-endoperoxide synthase activity
lipid binding
heme binding
metal ion binding
dioxygenase activity

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P137448 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P375942 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 384914 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 36323 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 973115 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 165440 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 903386 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 436910 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 9616 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 796367 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 811944 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 671498 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 951825 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 509363 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 936658 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 539019 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 17679 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 451639 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 79024 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 166559 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P137448 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P375942 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P375942 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P137448 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P137448 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P375942 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P137448 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 701647331 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700594261 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 66499 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 85256 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 100671 - -
Agilent Rat cDNA Microarray (G4105A) 700594261 - -
Agilent Rat cDNA Microarray (G4105A) 701647331 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10835826 - -
Affymetrix Rat Gene 1.0 ST Array 10835820 - -
Affymetrix Rat Gene 1.0 ST Array 10835824 - -
Affymetrix Rat Gene 1.0 ST Array 10835830 - -
Affymetrix Rat Gene 1.0 ST Array 10835819 - -
Affymetrix Rat Gene 1.0 ST Array 10835827 - -
Affymetrix Rat Gene 1.0 ST Array 10835822 - -
Affymetrix Rat Gene 1.0 ST Array 10835825 - -
Affymetrix Rat Gene 1.0 ST Array 10835818 - -
Affymetrix Rat Gene 1.0 ST Array 10835821 - -
Affymetrix Rat Gene 1.0 ST Array 10835829 - -
Affymetrix Rat Gene 1.0 ST Array 10835823 - -
Affymetrix Rat Gene 1.0 ST Array 10835828 - -
Affymetrix Rat Gene 1.1 ST Array 10835817 - -
Rat Genome 230 2.0 Array 1368259_at - -
Rat Genome 230 2.0 Array 1381806_at - -
Rat Genome 230 2.0 Array 1381806_PM_at - -
Rat Genome 230 2.0 Array 1368259_PM_at - -
Affymetrix HT Rat Focus Array 1368259_at - -
Affymetrix HT Rat Focus Array 1368259_PM_at - -
Affymetrix HT Rat Focus Array 1381806_at - -
Affymetrix HT Rat Focus Array 1381806_PM_at - -
Affymetrix Rat Clariom S Assay PSR0300003565.rn.1 TC0300000322.rn.1 RTA TC
Rat Expression Set 230 1368259_PM_at - -
Rat Expression Set 230 1368259_at - -
Rat Expression Set 230 1381806_PM_at - -
Rat Expression Set 230 1381806_at - -
Affymetrix Rat Gene 1.0 ST Array 10835817 - -
Rat Genome U34 Set U03388_s_at - -
Rat Genome U34 Set U03388_s_at - -
Rat Genome U34 Set U03388_s_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21300420 - -

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