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Gene Symbol:
Apc
Gene Name:
adenomatous polyposis coli
Gene Aliases:
RATAPC
Chromosome Location:
Chr.18: 27011706 - 27106323 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00560714_m1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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200.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Apc
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_012499.1 NP_036631.1 14 - 15 2009 104
XM_006254506.2 XP_006254568.1 15 - 16 2269 104
XM_006254508.2 XP_006254570.1 16 - 17 2110 104
XM_006254509.2 XP_006254571.1 16 - 17 2079 104
XM_006254510.2 XP_006254572.1 14 - 15 2215 104
XM_006254511.2 XP_006254573.1 15 - 16 2056 104
XM_006254512.2 XP_006254574.1 15 - 16 2718 104
XM_006254513.2 XP_006254575.1 14 - 15 2164 104
XM_006254515.2 XP_006254577.1 16 - 17 1935 104
XM_006254518.2 XP_006254580.1 15 - 16 2533 104
XM_006254520.2 XP_006254582.1 15 - 16 1966 104
XM_006254521.2 XP_006254583.1 15 - 16 1753 104
XM_008772015.1 XP_008770237.1 15 - 16 4201 104
XM_008772016.1 XP_008770238.1 15 - 16 4151 104
XM_008772017.1 XP_008770239.1 15 - 16 2542 104
GenBank mRNA D38629.1 - 14 - 15 2009 104

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800000255.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Apoptosis 3' Most Recommended Assay Rattus norvegicus Rat Wnt Panel Rat Tumor Metastasis Panel 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apc

Gene Ontology Categories:

Function(s) Process(es)

mitotic cytokinesis
kidney development
hair follicle development
protein complex assembly
cellular response to DNA damage stimulus
negative regulation of microtubule depolymerization
cell cycle arrest
metaphase/anaphase transition of mitotic cell cycle
mitotic spindle assembly checkpoint
establishment or maintenance of cell polarity
pattern specification process
axonogenesis
negative regulation of cell proliferation
axis specification
anterior/posterior pattern specification
dorsal/ventral pattern formation
proximal/distal pattern formation
Wnt signaling pathway
cell migration
stem cell population maintenance
negative regulation of Wnt signaling pathway
regulation of cell migration
positive regulation of cell migration
regulation of epithelial cell differentiation
positive regulation of epithelial cell differentiation
pancreas development
positive regulation of microtubule polymerization
cytoplasmic microtubule organization
neuron projection development
positive regulation of pseudopodium assembly
regulation of microtubule-based process
T cell differentiation in thymus
somatic stem cell population maintenance
negative regulation of odontogenesis
response to drug
positive regulation of apoptotic process
negative regulation of apoptotic process
negative regulation of MAPK cascade
skin development
canonical Wnt signaling pathway involved in negative regulation of apoptotic process
canonical Wnt signaling pathway involved in positive regulation of apoptotic process
regulation of cell differentiation
positive regulation of cell differentiation
regulation of osteoblast differentiation
regulation of osteoclast differentiation
positive regulation of protein catabolic process
negative regulation of cyclin-dependent protein serine/threonine kinase activity
positive regulation of cell adhesion
muscle cell cellular homeostasis
thymus development
negative regulation of epithelial cell proliferation
regulation of nitrogen compound metabolic process
chromosome organization
regulation of cell cycle
positive regulation of cell division
regulation of attachment of spindle microtubules to kinetochore
retina development in camera-type eye
canonical Wnt signaling pathway
negative regulation of epithelial cell proliferation involved in prostate gland development
negative regulation of canonical Wnt signaling pathway
response to alcohol
cellular response to nerve growth factor stimulus
regulation of glutamate metabolic process
protease binding
protein binding
beta-catenin binding
microtubule binding
protein kinase regulator activity
protein kinase binding
protein complex binding
gamma-catenin binding
cadherin binding
microtubule plus-end binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P276106 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 115301 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 636982 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 938971 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 614995 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 771827 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 780284 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 957742 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 249046 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 108851 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 46042 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 820362 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 313604 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 1447 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 624758 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 855023 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 450815 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 363452 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 727794 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 602319 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 870885 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 840674 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 770916 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 876227 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 626627 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 268540 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 40182 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 205993 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 713319 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 299894 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 829328 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 305050 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 5818 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 344430 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 136867 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 51746 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 770073 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 32881 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 500622 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 671940 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 397384 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 921790 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 190237 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 860162 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 882932 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 74788 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 130839 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 55901 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 124214 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 12336 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 104167 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 122855 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P276106 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P276106 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P276106 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P448864 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P276106 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 702029771 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 63775 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 34891 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 37703 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 55948 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 102538 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 25106 - -
Agilent Rat cDNA Microarray (G4105A) 702029771 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10800853 - -
Affymetrix Rat Gene 1.0 ST Array 10800855 - -
Affymetrix Rat Gene 1.0 ST Array 10800846 - -
Affymetrix Rat Gene 1.0 ST Array 10800857 - -
Affymetrix Rat Gene 1.0 ST Array 10800851 - -
Affymetrix Rat Gene 1.0 ST Array 10800848 - -
Affymetrix Rat Gene 1.0 ST Array 10800859 - -
Affymetrix Rat Gene 1.0 ST Array 10800856 - -
Affymetrix Rat Gene 1.0 ST Array 10800852 - -
Affymetrix Rat Gene 1.0 ST Array 10800849 - -
Affymetrix Rat Gene 1.0 ST Array 10800847 - -
Affymetrix Rat Gene 1.0 ST Array 10800845 - -
Affymetrix Rat Gene 1.0 ST Array 10800854 - -
Affymetrix Rat Gene 1.0 ST Array 10800858 - -
Affymetrix Rat Gene 1.0 ST Array 10800850 - -
Affymetrix Rat Gene 1.1 ST Array 10800844 - -
Rat Genome 230 2.0 Array 1376629_at - -
Rat Genome 230 2.0 Array 1376629_PM_at - -
Rat Genome 230 2.0 Array 1387837_at - -
Rat Genome 230 2.0 Array 1387837_PM_at - -
Affymetrix HT Rat Focus Array 1387837_at - -
Affymetrix HT Rat Focus Array 1387837_PM_at - -
Affymetrix Rat Clariom S Assay PSR1800001856.rn.1 TC1800000255.rn.1 RTA TC
Rat Expression Set 230 1387837_at - -
Rat Expression Set 230 1387837_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10800844 - -
Rat Genome U34 Set D38629_at - -
Rat Genome U34 Set L19306_s_at - -
Rat Genome U34 Set L19304_s_at - -
Rat Genome U34 Set rc_AA955065_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22347878 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1363282 - -
RatRef-12 Expression BeadChip ILMN_64937 - -

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Host server : magellan-search-5c796d7db4-nk9d7:80/100.66.128.142:80.
git-commit: d3b3aa98da0ae1b146c174fddb0766cfa6979daf
git-url: https://github.com/thermofisher/magellan-search
git-branch: release/2.36.2-2025.09.39-1.0