Speer5-ps1
Genomic Map
Back To TopAssay Details
| Gene Symbol: Speer5-ps1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_001582.2 | 7 | 1310 | 128 | ||
| NR_027506.1 | 4 | 848 | 128 | |||
| GenBank mRNA | BB679670.1 | - | 1 | 291 | 128 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | absent in melanoma 1 | Aim1 |
AI462491, AI463325 |
-70.1kb | Anti-sense | Chr. 10 - 43950307 - 44148924 on NCBI Build GRCm38 |
| Downstream |
predicted gene, 40637 |
Gm40637 | 48.2kb | Anti-sense | Chr. 10 - 44267742 - 44268243 on NCBI Build GRCm38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1000000412.mm.1Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Detect Genomic DNA
Mus musculus
1700
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2033278 | NR_001582.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2033278 | NR_027506.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2033278 | BB679670.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2033278 | DV646842.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P184508 | NR_001582.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P184508 | NR_027506.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P184508 | DV646842.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P184508 | NR_001582.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P184508 | NR_027506.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P184508 | DV646842.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2132223 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 774551 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 727504 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 166044 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 376386 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 207911 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 852828 | AK035267.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 852828 | AK145464.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 972096 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 61896 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 724593 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 210110 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 102404 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 149626 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 152661 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P141278 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2033278 | NR_001582.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2033278 | NR_027506.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2033278 | BB679670.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2033278 | DV646842.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2132223 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P07045218 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P141278 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P07045185 | - | - |
| Whole Mouse Genome G4122A | A_51_P184508 | NR_001582.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P184508 | NR_027506.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P184508 | DV646842.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P184508 | NR_001582.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P184508 | NR_027506.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P184508 | DV646842.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P134313 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P141278 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104285 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08291499 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104262 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104276 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08216440 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104225 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104260 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08626303 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08941992 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104223 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104211 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104259 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104222 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08712838 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104250 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08216439 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104240 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104214 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104229 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104198 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104200 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104243 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104283 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104270 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104213 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08739994 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104218 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104277 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104209 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104226 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104236 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104246 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104256 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104231 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104208 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104269 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104197 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08788976 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104265 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08904156 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104248 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104219 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104272 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104252 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08452229 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08900100 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104199 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104230 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104264 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104228 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P27104224 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08615062 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P08216441 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT MG-430 PM Array Plate | 1430008_PM_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1430008_PM_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1430008_x_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 70365_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 70365_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1000002803.mm.1 | NR_027506.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1000002803.mm.1 | TC1000000412.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1000002809.mm.1 | NR_001582.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1000002809.mm.1 | NR_027506.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1000002809.mm.1 | TC1000000412.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1000002811.mm.1 | NR_001582.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1000002811.mm.1 | NR_027506.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1000002811.mm.1 | TC1000000412.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1000002810.mm.1 | NR_001582.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1000002810.mm.1 | NR_027506.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1000002810.mm.1 | TC1000000412.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1430008_PM_x_at | - | - |
| Mouse Expression Set 430 | 1430008_x_at | - | - |
| Murine Genome U74v2 Set | 168149_PM_r_at | - | - |
| Murine Genome U74v2 Set | 168149_r_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1430008_x_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1430008_PM_x_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 812394 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 2850364 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 2850364 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0002850364 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2748533 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2748533 | - | - |
| mouse-6 v1.1 (Illumina) | scl38955.8.1_275-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 2850364 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl38955.8.1_275-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 2850364 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2748533 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2748533 | - | - |
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