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See other GM3086 GE Assays ›
Gene Symbol:
Gm3086
Gene Name:
RuvB-like protein 1 pseudogene
Gene Aliases:
-
Chromosome Location:
Chr.12: 69963409 - 69969744 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm04240947_m1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Gm3086
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_036607.1 2 - 3 179 82
GenBank mRNA BC027570.1 - 2 - 3 115 82
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BY723611.1 - 2 - 3 168 Chr. 12 - 69963420 - 69969739 [+] on Build GRCm38 82
GenBankmRNA AA985767.1 - 2 - 3 116 Chr. 12 - 69963473 - 69969710 [+] on Build GRCm38 82
GenBankmRNA AI006350.1 - 1 - 2 69 Chr. 12 - 69968397 - 69969672 [+] on Build GRCm38 81
GenBankmRNA BX514354.1 - 1 - 2 103 Chr. 12 - 69968372 - 69969736 [+] on Build GRCm38 82

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream salvador homolog 1 (Drosophila) Sav1 1700040G09Rik,
Salv,
Sav,
WW45,
Wwp3,
Wwp4
Anti-sense Chr. 12 - 69965012 - 69987002 on NCBI Build GRCm38
Downstream ninein Nin 3110068G20Rik,
AI385615,
AU024711,
mKIAA1565
41.7kb Anti-sense Chr. 12 - 70011435 - 70113830 on NCBI Build GRCm38

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More Information


Additional Information:

This assay is in the 5'UTR region of the BC027570.1 transcripts.

Set Membership:

Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Mus musculus Probe spans exons

MicroArray Probes:

Agilent Affymetrix

Array Name Probe IDs Targets Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2177371 BB635188.1 mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2177371 BC027570.1 mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2177371 NR_036607.1 mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2175585 - -
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2177371 BB635188.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2177371 BC027570.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2177371 NR_036607.1 mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P102379 - -
Array Name Probe IDs Targets Target Type
Affymetrix Mouse Gene 1.0 ST Array 10396144 - -
Affymetrix Mouse Gene 1.0 ST Array 10396145 - -
Affymetrix Mouse Gene 1.1 ST Array 10396143 - -
Affymetrix Mouse Clariom S Array PSR1200003914.mm.1 NR_036607.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200003914.mm.1 NR_036607.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200003914.mm.1 TC1200000580.mm.1 MTA TC

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