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See other ATXN3 GE Assays ›
Gene Symbol:
Atxn3
Gene Name:
ataxin 3
Gene Aliases:
2210008M02Rik, AI463012, AI647473, ATX3, MJD1, Mjd, Sca3, ataxin-3
Chromosome Location:
Chr.12: 101918901 - 101958800 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00804703_m1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Atxn3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001167914.1 NP_001161386.1 8 - 9 855 79
NM_029705.3 NP_083981.2 8 - 9 855 79
GenBank mRNA AF537188.1 - 8 - 9 769 79
AK008675.1 - 8 - 9 814 79
AK030842.1 - 8 - 9 795 79
AK076748.1 - 1 - 2 39 79
BC049743.1 - 8 - 9 855 79

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200002246.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atxn3

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Function(s) Process(es)

microtubule cytoskeleton organization
transcription, DNA-templated
regulation of transcription, DNA-templated
proteolysis
ubiquitin-dependent protein catabolic process
misfolded or incompletely synthesized protein catabolic process
regulation of cell-substrate adhesion
actin cytoskeleton organization
cellular response to heat
monoubiquitinated protein deubiquitination
exploration behavior
proteasome-mediated ubiquitin-dependent protein catabolic process
intermediate filament cytoskeleton organization
protein K63-linked deubiquitination
protein K48-linked deubiquitination
cellular response to misfolded protein
RNA polymerase II regulatory region DNA binding
histone deacetylase activity
thiol-dependent ubiquitin-specific protease activity
protein binding
peptidase activity
cysteine-type peptidase activity
omega peptidase activity
hydrolase activity
ubiquitin protein ligase binding
identical protein binding
ATPase binding
Lys63-specific deubiquitinase activity
Lys48-specific deubiquitinase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1200015558.mm.1 NM_001167914.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200015558.mm.1 NM_001167914.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200015558.mm.1 NM_029705.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200015558.mm.1 NM_029705.3 Refseq
Affymetrix Mouse Clariom S Array PSR1200015558.mm.1 TC1200002246.mm.1 MTA TC

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