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See other RBFOX2 GE Assays ›
Gene Symbol:
Rbfox2
Gene Name:
RNA binding protein, fox-1 homolog (C. elegans) 2
Gene Aliases:
Fbm2, Fxh, Hrnbp2, Rbm9
Chromosome Location:
Chr.15: 77078990 - 77307053 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00459714_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Rbfox2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001110827.2 NP_001104297.1 5 - 6 1166 94
NM_001110828.2 NP_001104298.1 4 - 5 708 94
NM_001110829.2 NP_001104299.1 4 - 5 708 94
NM_001110830.2 NP_001104300.1 4 - 5 708 94
NM_001286417.1 NP_001273346.1 4 - 5 708 94
NM_053104.6 NP_444334.3 5 - 6 1166 94
NM_175387.3 NP_780596.1 5 - 6 1166 94
GenBank mRNA AF229055.1 - 4 - 5 651 94
AF387322.1 - 4 - 5 452 94
AK044929.1 - 4 - 5 683 94
AK077594.1 - 5 - 6 1042 94
AK139555.1 - 6 - 7 1136 94
AY659951.1 - 4 - 5 452 94
AY659952.1 - 4 - 5 452 94
AY904025.1 - 6 - 7 602 94
BC002124.1 - 4 - 5 546 3494630 94
BC027263.1 - 5 - 6 718 3661748 94
DQ017388.1 - 4 - 5 452 94

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500001799.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rbfox2

Panther Classification:

Molecular Function -

RNA metabolism protein RNA processing factor RNA splicing factor nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

regulation of alternative mRNA splicing, via spliceosome
mRNA processing
RNA splicing
regulation of definitive erythrocyte differentiation
radial glia guided migration of Purkinje cell
intracellular estrogen receptor signaling pathway
regulation of RNA splicing
negative regulation of transcription, DNA-templated
dendrite morphogenesis
neuromuscular process controlling balance
nucleotide binding
nucleic acid binding
transcription corepressor activity
RNA binding
mRNA binding
protein binding
transcription factor binding
poly(A) RNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 NM_001110827.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 NM_001110828.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 NM_001110829.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 NM_001110830.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 NM_001286417.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 NM_053104.6 Refseq
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 NM_175387.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 NM_175387.3 Refseq
Affymetrix Mouse Clariom S Array PSR1500013996.mm.1 TC1500001799.mm.1 MTA TC

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