Name: [Hs04408924_s1] [LINC01436]
Creator: Thermo Fisher Scientific
Keywords: [LINC01436] Assay, [long intergenic non-protein coding RNA 1436] Assay

Assay Details

Gene Symbol: LINC01436
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110419.1		2	926		115

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AW196632.1	-	1		Chr. 21 - 36007522 - 36007838 [-] on Build GRCh38	115
GenBankmRNA	HY246010.1	-	1		Chr. 21 - 36007562 - 36008102 [-] on Build GRCh38	115
GenBankmRNA	BU595315.1	-		397	Chr. - - [-] on Build	116

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC101928269	LOC101928269		-2.7kb	Anti-sense	Chr. 21 - 35954660 - 36004667 on NCBI Build GRCh38
Downstream	SET domain containing 4	SETD4	C21orf18, C21orf27	26.2kb	Anti-sense	Chr. 21 - 36034541 - 36060818 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2100007025.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2100007025.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100007025.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100007025.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100007025.hg.1	NR_110419.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100007025.hg.1	NR_110419.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100007025.hg.1	NR_110419.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100007025.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007025.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	TC2100007025.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	TC2100007025.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	TC2100007025.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007025.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007025.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007025.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147435.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100147435.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147435.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100147435.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147435.hg.1	TC2100007025.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100147436.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100147436.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147436.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100147436.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147436.hg.1	TC2100007025.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100147437.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100147437.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147437.hg.1	ENST00000457157.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100147437.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147437.hg.1	TC2100007025.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100147438.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147438.hg.1	NR_110419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100147438.hg.1	TC2100007025.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map