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See other RT1.AA SIRNA Assays ›
Gene Symbol:
Rt1.aa RT1-A1 RT1-A2 RT1-A3 RT1-CE1 RT1-CE10 RT1-CE12 RT1-CE14 RT1-CE2 RT1-CE3 RT1-CE4 RT1-EC2
Gene Name:
MHC class I RT1.Aa alpha-chain
RT1 class Ia, locus A1
RT1 class Ia, locus A2
RT1 class I, locus A3
RT1 class I, locus1
RT1 class I, locus CE10
RT1 class I, locus CE12
RT1 class I, locus CE14
RT1 class I, locus CE2
RT1 class I, locus CE3
RT1 class I, locus CE4
RT1 class Ib, locus EC2
Gene Aliases:
-
RT1.A1(N), RT1A-1
RT1.A2(N), RT1A-2
RT1-A, RT1.A3
RT1-C/E1
-
-
-
RT1-C/E2
RT1-C/E3
RT1-C/E4
MHCRTA, RATMHCRTA, RT1-A, RT1-Aw2, RT1.Al, RT1.EC2, RT1Aw2, RTS
Chromosome Location:
-
Chromosome Location:
Chr.20: 5414464 - 5418012 on Build Rnor_6.0
Chromosome Location:
Chr.20: 5375011 - 5378536 on Build Rnor_6.0
Chromosome Location:
-
Chromosome Location:
Chr.20: 4638235 - 4792390 on Build Rnor_6.0
Chromosome Location:
Chr.20: 154072 - 157679 on Build Rnor_6.0
Chromosome Location:
-
Chromosome Location:
-
Chromosome Location:
-
Chromosome Location:
Chr.20: 4931965 - 4935372 on Build Rnor_6.0
Chromosome Location:
Chr.20: 4918523 - 4921339 on Build Rnor_6.0
Chromosome Location:
-
UniGene ID:
Rn.116787
Rn.233151
Rn.116787
Rn.116787
Rn.203332
Rn.219012
Rn.128939
Rn.234142
Rn.120283
Rn.40130
Rn.215620
Rn.116785
Species:
Rat
Species Specific ID (Flybase ID):
-
-
-
-
-
-
-
-
-
-
-
-
siRNA ID s236616

Purification
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Catalog # 4390771
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  • Genomic Map
  • siRNA Details
  • More Information

Genomic Map

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siRNA Details

Gene Symbol: Rt1.aa
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001134701.1 NP_001128173.1 4 453
GenBank mRNA BC166751.1 - 4 453 5621043
Y14014.1 - 3 376
Gene Symbol: RT1-A1
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008827.1 NP_001008827.1 3 448
XM_006256099.2 XP_006256161.1 3 479
GenBank mRNA FQ228888.1 - 3 495
FQ231496.1 - 3 468
KC222922.1 - 2 353
U50448.1 - 3 439
X90375.1 - 2 376
Gene Symbol: RT1-A2
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008829.1 NP_001008829.1 3 442
GenBank mRNA BC088465.1 - 3 458 7127909
FQ233418.1 - 3 468
X90376.1 - 2 376
Gene Symbol: RT1-A3
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008830.1 NP_001008830.1 4 439
GenBank mRNA U38971.1 - 4 439
Gene Symbol: RT1-CE1
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008832.2 NP_001008832.1 3 448
XM_008772726.1 XP_008770948.1 3 579
XM_008772727.1 XP_008770949.1 3 582
GenBank mRNA AJ005022.1 - 2 376
Gene Symbol: RT1-CE10
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008833.1 NP_001008833.1 3 448
XM_006255847.2 XP_006255909.1 3 453
GenBank mRNA BC083874.1 - 2 632
BC098952.1 - 3 451 7366301
Gene Symbol: RT1-CE12
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008835.1 NP_001008835.1 448
Gene Symbol: RT1-CE14
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008837.1 NP_001008837.1 3 448
NM_001033985.1 NP_001029157.1 2 452
GenBank mRNA BC083799.1 - 2 452 7108728
Gene Symbol: RT1-CE2
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008840.1 NP_001008840.1 3 439
Gene Symbol: RT1-CE3
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008841.2 NP_001008841.1 3 448
Gene Symbol: RT1-CE4
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_001008842.1 NP_001008842.1 3 448
Gene Symbol: RT1-EC2
Interrogated Sequence Translated Protein Targeted Exon(s) siRNA Location IMAGE Clone ID
RefSeq NM_012645.1 NP_036777.1 3 457
GenBank mRNA AF400159.1 - 3 457
AJ004887.1 - 2 376
AJ004888.1 - 2 376
AJ005024.1 - 2 376
AJ005025.1 - 2 376
AJ249698.1 - 3 376
AJ249699.1 - 2 376
AJ249700.1 - 2, 3 376
AJ249701.1 - 3 376
AJ249702.1 - 3 376
AJ249703.1 - 3 382
AJ249704.1 - 2 376
AJ249705.1 - 2 376
AJ306619.1 - 3 457
BC061817.1 - 4 458 5598840
L26224.1 - 3 457
L40363.1 - 4 436
L40365.1 - 3 457
M24023.1 - 2 226
M25319.1 - 2 436
M31018.1 - 4 457
M31038.1 - 3 457
U38970.1 - 3 439
U38972.1 - 4 439
X82106.1 - 2 376
X90370.1 - 2 376
X90371.1 - 3 376
X90372.1 - 2 376
X90373.1 - 3 376
X90374.1 - 2 376
X99767.1 - 2 376
Y08532.1 - 3 376
Y13579.1 - 2 376

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More Information


Other Species Targeted

This siRNA also targets the following transcripts in Human: D87665.
This siRNA also targets the following transcripts in Mouse: NM_207648, NM_001025208, NM_001143689, NM_010394, NM_010380, and others.

Gene Ontology Categories:

Function(s) Process(es)

positive regulation of T cell mediated cytotoxicity
antigen processing and presentation of peptide antigen via MHC class I
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent
immune response
T cell tolerance induction
positive regulation of tolerance induction to nonself antigen
negative regulation of natural killer cell mediated cytotoxicity
receptor binding
peptide antigen binding
protein binding
beta-2-microglobulin binding
peptide binding
protein heterodimerization activity

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git-commit: 795bdb1f794b4b81290d0c522fee4b91276a707f
git-url: https://github.com/thermofisher/magellan-search
git-branch: release/2.36.2-2025.09.39-1.0