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SNP ID:
rs9349379
Gene
PHACTR1
Gene Name
Set Membership:
> HapMap
Chromosome Location:
Chr.6: 12903725 - 12903725 on Build GRCh38
Polymorphism:
A/G, Transition substitution
Context Sequence [VIC/FAM]:

TCTATGCCCTTGAGATCATATAAAA[A/G]TAGCTTAAAATCATTGGCCATAGTT

Assay ID C___1756707_10
Size
Availability Made To Order
Catalog # 4351379
Price
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Assay Details



Species:

 Human

dbSNP Submissions:

 NA

Phenotype:

 MIM: 608723

Literature Links:

 PHACTR1 PubMed Links

Allele Nomenclature:

Minor Allele Frequency:
1000Genome Applied Biosystems® HapMap
Global
G (0.38)
(0.62)
Caucasian - Not Available CEPH (CEU)
G (0.37)
(0.63)
EAS
A (0.32)
(0.68)
African American - Not Available YRI (Yoruba)
G (0.03)
(0.97)
SAS
A (0.49)
(0.51)
Chinese - Not Available JPT (Japanese)
A (0.27)
(0.73)
AFR
G (0.03)
(0.97)
Japanese - Not Available CHB (Han Chinese)
A (0.21)
(0.79)
EUR
G (0.40)
(0.60)
AMR
G (0.38)
(0.62)
PHACTR1 - phosphatase and actin regulator 1
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_001242648.2 Intron NP_001229577.1
NM_001322308.1 Intron NP_001309237.1
NM_001322309.1 Intron NP_001309238.1
NM_001322310.1 Intron NP_001309239.1
NM_001322311.1 Intron NP_001309240.1
NM_001322312.1 Intron NP_001309241.1
NM_001322313.1 Intron NP_001309242.1
NM_001322314.1 Intron NP_001309243.1
NM_030948.3 Intron NP_112210.1
XM_005248934.2 Intron XP_005248991.1
XM_017010452.1 Intron XP_016865941.1
XM_017010454.1 Intron XP_016865943.1
XM_017010455.1 Intron XP_016865944.1
XM_017010456.1 Intron XP_016865945.1
XM_017010457.1 Intron XP_016865946.1
XM_017010458.1 Intron XP_016865947.1
XM_017010459.1 Intron XP_016865948.1
XM_017010460.1 Intron XP_016865949.1
XM_017010461.1 Intron XP_016865950.1
XM_017010462.1 Intron XP_016865951.1
XM_017010463.1 Intron XP_016865952.1
XM_017010464.1 Intron XP_016865953.1
XM_017010465.1 Intron XP_016865954.1
XM_017010466.1 Intron XP_016865955.1
XM_017010467.1 Intron XP_016865956.1
XM_017010469.1 Intron XP_016865958.1

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