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SNP ID:
rs138213197
Gene
HOXB13 MIR3185 PRAC1 PRAC2
Gene Name
homeobox B13
microRNA 3185
prostate cancer susceptibility candidate 1
prostate cancer susceptibility candidate 2
Set Membership:
> Qualified
Chromosome Location:
Chr.17: 48728343 - 48728343 on Build GRCh38
Polymorphism:
C/T, Transition substitution
Context Sequence [VIC/FAM]:

CACTCGGCAGGAGTAGTACCCGCCT[C/T]CAAAGTAACCATAAGGCACGGGAGC

Assay ID C_164436492_20
Size
Availability Made To Order
Catalog # 4351379
Price
Your Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details



Species:

Human

dbSNP Submissions:

NA

Phenotype:

MIM: 604607 MIM: 609819 MIM: 610787

Literature Links:

HOXB13 PubMed Links

Allele Nomenclature:

Minor Allele Frequency:

1000Genome Applied Biosystems® HapMap
Global
T (0.00)
(1.00)
Caucasian - Not Available CEPH (CEU) - Not Available
EAS
T (0.00)
(1.00)
African American - Not Available YRI (Yoruba) - Not Available
SAS
T (0.00)
(1.00)
Chinese - Not Available CHB (Han Chinese) - Not Available
AFR
T (0.00)
(1.00)
Japanese - Not Available JPT (Japanese) - Not Available
EUR
T (0.00)
(1.00)
AMR
T (0.00)
(1.00)
HOXB13 - homeobox B13
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_006361.5 407 Missense Mutation GAA,GGA E,G 84 NP_006352.2
MIR3185 - microRNA 3185
There are no transcripts associated with this gene.
PRAC1 - prostate cancer susceptibility candidate 1
There are no transcripts associated with this gene.
PRAC2 - prostate cancer susceptibility candidate 2
There are no transcripts associated with this gene.

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More Information


Set Membership:

Qualified

Gene Ontology Categories:

Function(s) Process(es)

angiogenesis
transcription, DNA-templated
regulation of transcription, DNA-templated
epidermis development
response to wounding
response to testosterone
regulation of growth
prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis
epithelial cell maturation involved in prostate gland development
sequence-specific DNA binding

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