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See other LOC105375056 GT Assays ›
SNP ID:
rs75932628
Gene
LOC105375056 TREM2 TREML1
Gene Name
uncharacterized LOC105375056
triggering receptor expressed on myeloid cells 2
triggering receptor expressed on myeloid cells like 1
Set Membership:
-
Chromosome Location:
Chr.6: 41161514 - 41161514 on Build GRCh38
Polymorphism:
C/T, Transition substitution
Context Sequence [VIC/FAM]:

TCCCAGCTGGCGGCACCAGGCCTTG[C/T]GCCTCCCCCAGTGCTTCATGGAGTC

Assay ID C_100657057_10
Size
Availability Made To Order
Catalog # 4351379
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details



Species:

Human

dbSNP Submissions:

NA

Phenotype:

MIM: 605086 MIM: 609714

Literature Links:

LOC105375056 PubMed Links

Allele Nomenclature:

Minor Allele Frequency:

1000Genome Applied Biosystems® HapMap
Global
T (0.00)
(1.00)
Caucasian - Not Available CEPH (CEU) - Not Available
EAS
T (0.00)
(1.00)
African American - Not Available YRI (Yoruba) - Not Available
SAS
T (0.00)
(1.00)
Chinese - Not Available CHB (Han Chinese) - Not Available
AFR
T (0.00)
(1.00)
Japanese - Not Available JPT (Japanese) - Not Available
EUR
T (0.01)
(0.99)
AMR
T (0.00)
(1.00)
LOC105375056 - uncharacterized LOC105375056
There are no transcripts associated with this gene.
TREM2 - triggering receptor expressed on myeloid cells 2
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_001271821.1 244 Missense Mutation NP_001258750.1
NM_018965.3 244 Missense Mutation NP_061838.1
XM_006715116.3 244 Intron XP_006715179.1
TREML1 - triggering receptor expressed on myeloid cells like 1
There are no transcripts associated with this gene.

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More Information


Panther Classification:

Molecular Function -

immunoglobulin receptor superfamily

Gene Ontology Categories:

Function(s) Process(es)

positive regulation of antigen processing and presentation of peptide antigen via MHC class II
phagocytosis, engulfment
humoral immune response
detection of lipopolysaccharide
detection of peptidoglycan
innate immune response
positive regulation of peptidyl-tyrosine phosphorylation
regulation of immune response
positive regulation of calcium-mediated signaling
positive regulation of ERK1 and ERK2 cascade
detection of lipoteichoic acid
cellular response to lipoteichoic acid
cellular response to peptidoglycan
dendritic cell differentiation
positive regulation of protein localization to plasma membrane
positive regulation of C-C chemokine receptor CCR7 signaling pathway
positive regulation of CD40 signaling pathway
lipopolysaccharide binding
receptor activity
peptidoglycan binding
lipoteichoic acid binding
scaffold protein binding

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