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Gene Symbol:
Trim25
Gene Name:
tripartite motif-containing 25
Gene Aliases:
Efp, Znf147
Chromosome Location:
Chr.10: 76343847 - 76362159 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn02346964_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Trim25
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001009536.1 NP_001009536.1 5 - 6 1218 152
GenBank mRNA BC061749.1 - 5 - 6 1218 5599464 152

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000001372.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Trim25

Gene Ontology Categories:

Function(s) Process(es)

response to vitamin D
positive regulation of I-kappaB kinase/NF-kappaB signaling
response to estrogen
innate immune response
regulation of viral entry into host cell
negative regulation of viral entry into host cell
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of NF-kappaB transcription factor activity
regulation of viral release from host cell
negative regulation of viral release from host cell
molecular_function
zinc ion binding
poly(A) RNA binding

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P318466 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 815477 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 681838 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 693346 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 17098 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 77055 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 346450 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 423953 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 918201 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 899077 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 434596 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 54867 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 294724 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 28855 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 159179 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P318466 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P318466 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P318466 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P318466 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 64086 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 44091 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10737421 - -
Affymetrix Rat Gene 1.0 ST Array 10737415 - -
Affymetrix Rat Gene 1.0 ST Array 10737417 - -
Affymetrix Rat Gene 1.0 ST Array 10737419 - -
Affymetrix Rat Gene 1.0 ST Array 10737414 - -
Affymetrix Rat Gene 1.0 ST Array 10737413 - -
Affymetrix Rat Gene 1.0 ST Array 10737420 - -
Affymetrix Rat Gene 1.0 ST Array 10737412 - -
Affymetrix Rat Gene 1.0 ST Array 10737416 - -
Affymetrix Rat Gene 1.0 ST Array 10737418 - -
Affymetrix Rat Gene 1.1 ST Array 10737411 - -
Rat Genome 230 2.0 Array 1377726_PM_at - -
Rat Genome 230 2.0 Array 1377726_at - -
Affymetrix HT Rat Focus Array 1377726_at - -
Affymetrix HT Rat Focus Array 1377726_PM_at - -
Affymetrix Rat Clariom S Assay PSR1000012584.rn.1 TC1000001372.rn.1 RTA TC
Rat Expression Set 230 1377726_PM_at - -
Rat Expression Set 230 1377726_at - -
Affymetrix Rat Gene 1.0 ST Array 10737411 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1351248 - -
RatRef-12 Expression BeadChip ILMN_65283 - -

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