Srf
Genomic Map
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| Gene Symbol: Srf | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001109302.1 | NP_001102772.1 | 1 - 2 | 833 | 65 | |
| XM_006244557.2 | XP_006244619.1 | 1 - 2 | 836 | 65 | ||
| XM_006244558.2 | XP_006244620.1 | 1 - 2 | 837 | 65 | ||
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0900000222.rn.1Set Membership: |
Amplicon length less than or equal to 70
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
patterning of blood vessels
response to hypoxia
in utero embryonic development
mesoderm formation
neuron migration
trophectodermal cell differentiation
heart looping
morphogenesis of an epithelial sheet
cell migration involved in sprouting angiogenesis
leukocyte differentiation
positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
actin filament organization
cell-matrix adhesion
gastrulation
heart development
long-term memory
negative regulation of cell proliferation
associative learning
response to hormone
epithelial structure maintenance
positive regulation of transcription via serum response element binding
single organismal cell-cell adhesion
hippocampus development
tangential migration from the subventricular zone to the olfactory bulb
actin cytoskeleton organization
contractile actin filament bundle assembly
regulation of cell adhesion
platelet activation
platelet formation
negative regulation of cell migration
neuron projection development
regulation of water loss via skin
response to cytokine
megakaryocyte development
dorsal aorta morphogenesis
mRNA transcription from RNA polymerase II promoter
stress fiber assembly
skin morphogenesis
positive thymic T cell selection
sarcomere organization
positive regulation of cell differentiation
positive regulation of axon extension
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of smooth muscle contraction
positive regulation of transcription by glucose
muscle cell cellular homeostasis
developmental growth
erythrocyte development
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of filopodium assembly
cardiac myofibril assembly
hematopoietic stem cell differentiation
positive regulation of transcription initiation from RNA polymerase II promoter
long term synaptic depression
heart trabecula formation
lung morphogenesis
bronchus cartilage development
trachea cartilage development
cardiac vascular smooth muscle cell differentiation
eyelid development in camera-type eye
lung smooth muscle development
bicellular tight junction assembly
cellular response to glucose stimulus
primitive streak formation
epithelial cell-cell adhesion
cellular senescence
negative regulation of beta-amyloid clearance
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcription factor activity, RNA polymerase II core promoter sequence-specific
transcription factor activity, RNA polymerase II transcription factor binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
transcription factor binding
serum response element binding
chromatin DNA binding
protein homodimerization activity
histone deacetylase binding
sequence-specific DNA binding
patterning of blood vessels
response to hypoxia
in utero embryonic development
mesoderm formation
neuron migration
trophectodermal cell differentiation
heart looping
morphogenesis of an epithelial sheet
cell migration involved in sprouting angiogenesis
leukocyte differentiation
positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
actin filament organization
cell-matrix adhesion
gastrulation
heart development
long-term memory
negative regulation of cell proliferation
associative learning
response to hormone
epithelial structure maintenance
positive regulation of transcription via serum response element binding
single organismal cell-cell adhesion
hippocampus development
tangential migration from the subventricular zone to the olfactory bulb
actin cytoskeleton organization
contractile actin filament bundle assembly
regulation of cell adhesion
platelet activation
platelet formation
negative regulation of cell migration
neuron projection development
regulation of water loss via skin
response to cytokine
megakaryocyte development
dorsal aorta morphogenesis
mRNA transcription from RNA polymerase II promoter
stress fiber assembly
skin morphogenesis
positive thymic T cell selection
sarcomere organization
positive regulation of cell differentiation
positive regulation of axon extension
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of smooth muscle contraction
positive regulation of transcription by glucose
muscle cell cellular homeostasis
developmental growth
erythrocyte development
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of filopodium assembly
cardiac myofibril assembly
hematopoietic stem cell differentiation
positive regulation of transcription initiation from RNA polymerase II promoter
long term synaptic depression
heart trabecula formation
lung morphogenesis
bronchus cartilage development
trachea cartilage development
cardiac vascular smooth muscle cell differentiation
eyelid development in camera-type eye
lung smooth muscle development
bicellular tight junction assembly
cellular response to glucose stimulus
primitive streak formation
epithelial cell-cell adhesion
cellular senescence
negative regulation of beta-amyloid clearance
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcription factor activity, RNA polymerase II core promoter sequence-specific
transcription factor activity, RNA polymerase II transcription factor binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
transcription factor binding
serum response element binding
chromatin DNA binding
protein homodimerization activity
histone deacetylase binding
sequence-specific DNA binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P15205 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 58491 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 584446 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 2497 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 419811 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P15205 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P15205 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P15205 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P10479 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P15205 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P143061 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10921552 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10921556 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10921554 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10921553 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10921551 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10921557 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10921555 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10921550 | - | - |
| Rat Genome 230 2.0 Array | 1388842_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1388842_at | - | - |
| Rat Genome 230 2.0 Array | 1395378_at | - | - |
| Rat Genome 230 2.0 Array | 1395378_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1374829_at | - | - |
| Rat Genome 230 2.0 Array | 1374829_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1388842_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1374829_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1374829_at | - | - |
| Affymetrix HT Rat Focus Array | 1388842_at | - | - |
| Affymetrix HT Rat Focus Array | 1395378_at | - | - |
| Affymetrix HT Rat Focus Array | 1395378_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0900001914.rn.1 | TC0900000222.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0900001919.rn.1 | TC0900000222.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0900001920.rn.1 | TC0900000222.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0900001915.rn.1 | TC0900000222.rn.1 | RTA TC |
| Rat Expression Set 230 | 1374829_at | - | - |
| Rat Expression Set 230 | 1374829_PM_at | - | - |
| Rat Expression Set 230 | 1388842_at | - | - |
| Rat Expression Set 230 | 1388842_PM_at | - | - |
| Rat Expression Set 230 | 1395378_at | - | - |
| Rat Expression Set 230 | 1395378_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10921550 | - | - |
| Rat Genome U34 Set | rc_AI044527_at | - | - |
| Rat Genome U34 Set | rc_AI101587_s_at | - | - |
| Rat Genome U34 Set | rc_AA819046_at | - | - |
| Rat Genome U34 Set | rc_AI101587_r_at | - | - |
| Rat Genome U34 Set | rc_AI237009_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21800879 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1362760 | - | - |
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