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Gene Symbol:
Stub1
Gene Name:
STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase
Gene Aliases:
Chip
Chromosome Location:
Chr.10: 15197754 - 15200035 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01751757_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Stub1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001025625.2 NP_001020796.2 3 - 4 633 65
GenBank mRNA BC099240.1 - 3 - 4 580 7445727 65
CB326459.1 - 4 - 5 65

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000002441.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Stub1

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)

protein polyubiquitination
ubiquitin-dependent protein catabolic process
misfolded or incompletely synthesized protein catabolic process
ubiquitin-dependent SMAD protein catabolic process
endoplasmic reticulum unfolded protein response
positive regulation of protein ubiquitination
regulation of glucocorticoid metabolic process
negative regulation of protein binding
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
positive regulation of ubiquitin-protein transferase activity
protein autoubiquitination
protein K63-linked ubiquitination
cellular response to misfolded protein
positive regulation of chaperone-mediated protein complex assembly
G-protein coupled receptor binding
ubiquitin-protein transferase activity
protein binding
ligase activity
enzyme binding
kinase binding
Hsp70 protein binding
TPR domain binding
ubiquitin protein ligase binding
ubiquitin-ubiquitin ligase activity
protein homodimerization activity
SMAD binding
misfolded protein binding
Hsp90 protein binding
ubiquitin protein ligase activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P089091 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P089091 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P089091 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P089091 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P161831 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10741538 - -
Affymetrix Rat Gene 1.0 ST Array 10741543 - -
Affymetrix Rat Gene 1.0 ST Array 10741542 - -
Affymetrix Rat Gene 1.0 ST Array 10741539 - -
Affymetrix Rat Gene 1.0 ST Array 10741537 - -
Affymetrix Rat Gene 1.0 ST Array 10741536 - -
Affymetrix Rat Gene 1.0 ST Array 10741541 - -
Affymetrix Rat Gene 1.0 ST Array 10741540 - -
Affymetrix Rat Gene 1.1 ST Array 10732511 - -
Affymetrix Rat Gene 1.1 ST Array 10741535 - -
Rat Genome 230 2.0 Array 1398910_at - -
Rat Genome 230 2.0 Array 1374124_at - -
Rat Genome 230 2.0 Array 1398910_PM_at - -
Rat Genome 230 2.0 Array 1374124_PM_at - -
Affymetrix HT Rat Focus Array 1398910_at - -
Affymetrix HT Rat Focus Array 1398910_PM_at - -
Affymetrix Rat Clariom S Assay PSR1000021996.rn.1 TC1000002441.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1000021995.rn.1 TC1000002441.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1000021998.rn.1 TC1000002441.rn.1 RTA TC
Rat Expression Set 230 1398910_PM_at - -
Rat Expression Set 230 1398910_at - -
Affymetrix Rat Gene 1.0 ST Array 10741535 - -
Rat Genome U34 Set rc_AA849721_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21313256 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1350492 - -

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