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See other TCF21 GE Assays ›
Gene Symbol:
Tcf21
Gene Name:
transcription factor 21
Gene Aliases:
Capsulin, Msf-1, Pod1
Chromosome Location:
Chr.1: 23906717 - 23909576 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01537344_m1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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Online offer: 200.00
200.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tcf21
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001032397.1 NP_001027569.1 1 - 2 681 95
GenBank mRNA BC100106.1 - 1 - 2 681 7379660 95

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100000263.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tcf21

Panther Classification:

Molecular Function -

basic helix-loop-helix transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
ureteric bud development
branching involved in ureteric bud morphogenesis
morphogenesis of a branching structure
kidney development
vasculature development
sex determination
sex differentiation
organ morphogenesis
branchiomeric skeletal muscle development
epithelial cell differentiation
glomerulus development
positive regulation of transcription from RNA polymerase II promoter
lung alveolus development
spleen development
embryonic digestive tract morphogenesis
reproductive structure development
gland development
Sertoli cell differentiation
palate development
lung morphogenesis
lung vasculature development
bronchiole development
diaphragm development
respiratory system development
negative regulation of androgen receptor signaling pathway
metanephric mesenchymal cell differentiation
metanephric glomerular capillary formation
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
histone deacetylase binding
bHLH transcription factor binding
protein dimerization activity
androgen receptor binding
E-box binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P060662 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 228792 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 74156 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P060662 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P060662 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P060662 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P224614 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 701094614 - -
Agilent Rat cDNA Microarray (G4105A) 701094614 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10702308 - -
Affymetrix Rat Gene 1.0 ST Array 10702307 - -
Affymetrix Rat Gene 1.1 ST Array 10702306 - -
Rat Genome 230 2.0 Array 1388782_PM_at - -
Rat Genome 230 2.0 Array 1388782_at - -
Affymetrix HT Rat Focus Array 1388782_at - -
Affymetrix HT Rat Focus Array 1388782_PM_at - -
Affymetrix Rat Clariom S Assay PSR0100001488.rn.1 TC0100000263.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0100001489.rn.1 TC0100000263.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0100001490.rn.1 TC0100000263.rn.1 RTA TC
Rat Expression Set 230 1388782_at - -
Rat Expression Set 230 1388782_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10702306 - -
Rat Genome U34 Set AF061752_at - -
Rat Genome U34 Set rc_AA800748_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 20902858 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1352700 - -

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