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Gene Symbol:
Celf3
Gene Name:
CUGBP, Elav-like family member 3
Gene Aliases:
RGD1563168, Tnrc4
Chromosome Location:
Chr.2: 195716360 - 195732872 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01533600_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Celf3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001109190.2 NP_001102660.1 12 - 13 2199 84
XM_006232897.2 XP_006232959.1 12 - 13 2209 84
XM_006232898.2 XP_006232960.1 12 - 13 2207 84
XM_006232900.2 XP_006232962.1 12 - 13 2122 84
XM_006232902.2 XP_006232964.1 11 - 12 2059 84
XM_006232903.2 XP_006232965.1 11 - 12 2580 84
XM_006232904.2 XP_006232966.1 13 - 14 3937 84
XM_006232905.2 XP_006232967.1 13 - 14 3970 84
XM_006232906.2 XP_006232968.1 11 - 12 5042 84
XM_006232907.2 XP_006232969.1 11 - 12 1527 84
XM_006232908.2 XP_006232970.1 11 - 12 1973 84
XM_006232911.2 XP_006232973.1 11 - 12 1404 84
XM_006232912.2 XP_006232974.1 10 - 11 1326 84
XM_008761322.1 XP_008759544.1 13 - 14 4524 84
XM_008761323.1 XP_008759545.1 12 - 13 1493 84
XM_008761324.1 XP_008759546.1 11 - 12 3647 84
XM_008761325.1 XP_008759547.1 11 - 12 3601 84
XM_008761326.1 XP_008759548.1 11 - 12 3598 84

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001684.rn.1

Set Membership:

Amplicon length between 71 and 85 3' Most Recommended Assay Rattus norvegicus 1700 Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

regulation of alternative mRNA splicing, via spliceosome
spermatogenesis
biological_process
RNA splicing
sperm motility
positive regulation of mRNA splicing, via spliceosome
nucleotide binding
molecular_function
RNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P037156 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 640771 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 734801 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 501410 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 170557 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 537834 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 397419 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 267005 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 905841 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 96420 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 632168 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 4503 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P691593 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P691593 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P691593 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 10115 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10817267 - -
Affymetrix Rat Gene 1.0 ST Array 10817269 - -
Affymetrix Rat Gene 1.0 ST Array 10817261 - -
Affymetrix Rat Gene 1.0 ST Array 10817268 - -
Affymetrix Rat Gene 1.0 ST Array 10817264 - -
Affymetrix Rat Gene 1.0 ST Array 10817273 - -
Affymetrix Rat Gene 1.0 ST Array 10817271 - -
Affymetrix Rat Gene 1.0 ST Array 10817265 - -
Affymetrix Rat Gene 1.0 ST Array 10817266 - -
Affymetrix Rat Gene 1.0 ST Array 10817262 - -
Affymetrix Rat Gene 1.0 ST Array 10817270 - -
Affymetrix Rat Gene 1.0 ST Array 10817263 - -
Affymetrix Rat Gene 1.0 ST Array 10817272 - -
Affymetrix Rat Gene 1.1 ST Array 10817260 - -
Rat Genome 230 2.0 Array 1382338_PM_at - -
Rat Genome 230 2.0 Array 1382338_at - -
Affymetrix HT Rat Focus Array 1382338_PM_at - -
Affymetrix HT Rat Focus Array 1382338_at - -
Affymetrix Rat Clariom S Assay PSR0200011249.rn.1 TC0200001684.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200011252.rn.1 TC0200001684.rn.1 RTA TC
Rat Expression Set 230 1382338_PM_at - -
Rat Expression Set 230 1382338_at - -
Affymetrix Rat Gene 1.0 ST Array 10817260 - -
Rat Genome U34 Set rc_AI102503_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21631201 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1357868 - -

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