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See other POU5F1 GE Assays ›
Gene Symbol:
Pou5f1
Gene Name:
POU class 5 homeobox 1
Gene Aliases:
-
Chromosome Location:
Chr.20: 3747231 - 3751994 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01532129_g1
Size
Availability Inventoried
Catalog # 4331182
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Pou5f1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001009178.2 NP_001009178.1 3 - 4 711 59
GenBank mRNA BC158566.1 - 3 - 4 711 9092936 59

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pou5f1

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
mesodermal cell fate commitment
endodermal cell fate commitment
ectodermal cell fate commitment
endodermal cell fate specification
trophectodermal cell differentiation
blastocyst growth
BMP signaling pathway involved in heart induction
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
response to wounding
regulation of asymmetric cell division
response to organic substance
regulation of gene expression
stem cell population maintenance
germ-line stem cell population maintenance
response to retinoic acid
response to cytokine
somatic stem cell population maintenance
positive regulation of catenin import into nucleus
mRNA transcription from RNA polymerase II promoter
cell fate commitment
negative regulation of cell differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
negative regulation of calcium ion-dependent exocytosis
stem cell differentiation
positive regulation of protein kinase B signaling
negative regulation of protein kinase B signaling
positive regulation of SMAD protein import into nucleus
cell fate commitment involved in formation of primary germ layer
cardiac cell fate determination
negative regulation of gene silencing by miRNA
regulation of heart induction by regulation of canonical Wnt signaling pathway
regulation of methylation-dependent chromatin silencing
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription coactivator activity
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription corepressor activity
protein binding
transcription factor binding
ubiquitin protein ligase binding
miRNA binding
sequence-specific DNA binding
transcription regulatory region DNA binding
poly(A) RNA binding
protein heterodimerization activity
POU domain binding
HMG box domain binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P000271 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P000271 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P000271 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P000271 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P156952 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 95987 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10833963 - -
Affymetrix Rat Gene 1.0 ST Array 10833966 - -
Affymetrix Rat Gene 1.0 ST Array 10833968 - -
Affymetrix Rat Gene 1.0 ST Array 10833965 - -
Affymetrix Rat Gene 1.0 ST Array 10833964 - -
Affymetrix Rat Gene 1.1 ST Array 10833962 - -
Affymetrix Rat Clariom S Assay PSR2000008537.rn.1 TC2000001054.rn.1 RTA TC
Affymetrix Rat Gene 1.0 ST Array 10833962 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21946268 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1376841 - -

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