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See other RT1-S3 GE Assays ›
Gene Symbol:
RT1-S3
Gene Name:
RT1 class Ib, locus S3
Gene Aliases:
H2-T23, RT-BM1, RT1-BM1, RTBM1
Chromosome Location:
Chr.20: 3176014 - 3180825 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01531988_m1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: RT1-S3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001008886.2 NP_001008886.2 7 - 8 1146 98
GenBank mRNA AF029241.1 - 7 - 8 1071 98
FQ209394.1 - 7 - 8 1136 98
FQ232669.1 - 7 - 8 1137 98
X16979.1 - 6 - 7 866 98

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000088.rn.1

Set Membership:

Amplicon length between 86 and 100 3' Most Rattus norvegicus 1700 Probe spans exons

Panther Classification:

Molecular Function -

major histocompatibility complex protein

Gene Ontology Categories:

Function(s) Process(es)

positive regulation of T cell mediated cytotoxicity
antigen processing and presentation of peptide antigen via MHC class I
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent
immune response
inner ear development
receptor binding
peptide antigen binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR2000000493.rn.1 TC2000000088.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000000495.rn.1 TC2000000088.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000000494.rn.1 TC2000000088.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000000492.rn.1 TC2000000088.rn.1 RTA TC
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 20900295 - -

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