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See other TRIM13 GE Assays ›
Gene Symbol:
Trim13
Gene Name:
tripartite motif-containing 13
Gene Aliases:
-
Chromosome Location:
Chr.15: 41927180 - 41936529 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01530347_g1
Size
Availability Inventoried
Catalog # 4331182
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Trim13
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001012210.1 NP_001012210.1 2 - 3 119 137
XM_006252137.2 XP_006252199.1 2 - 3 206 137
GenBank mRNA BC088425.1 - 2 - 3 119 7123847 137

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.
This assay is in the 5'UTR region of the BC088425.1,NM_001012210.1,XM_006252137.2 transcripts.

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Detect Genomic DNA Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Trim13

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)

signal transduction
response to gamma radiation
positive regulation of cell death
positive regulation of macroautophagy
ER-associated ubiquitin-dependent protein catabolic process
negative regulation of viral transcription
positive regulation of I-kappaB kinase/NF-kappaB signaling
proteasome-mediated ubiquitin-dependent protein catabolic process
innate immune response
positive regulation of NF-kappaB transcription factor activity
protein autoubiquitination
negative regulation of viral release from host cell
ubiquitin-protein transferase activity
signal transducer activity
zinc ion binding
ligase activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P109977 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 204848 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 259842 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 700997 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 629242 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 765961 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 357400 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 22326 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P109977 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P109977 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P109977 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P109977 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 92011 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 76323 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10780929 - -
Affymetrix Rat Gene 1.0 ST Array 10780930 - -
Affymetrix Rat Gene 1.1 ST Array 10780924 - -
Affymetrix Rat Clariom S Assay PSR1500004391.rn.1 TC1500000626.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1500004392.rn.1 TC1500000626.rn.1 RTA TC
Affymetrix Rat Gene 1.0 ST Array 10780924 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22155216 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1376444 - -
Illumina ratRef-12 v1.0 expression beadchip ILMN_1376030 - -

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