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Gene Symbol:
Vapb
Gene Name:
VAMP (vesicle-associated membrane protein)-associated protein B and C
Gene Aliases:
-
Chromosome Location:
Chr.3: 171832558 - 171870198 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01528873_m1
Best Coverage
Size
Availability Made To Order
Catalog # 4351372
Price 374.00
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Online offer:
374.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Vapb
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_021847.3 NP_068619.1 5 - 6 575 128
XM_006235706.2 XP_006235768.2 5 - 6 749 128
GenBank mRNA AF086631.1 - 5 - 6 575 128
BC065576.1 - 5 - 6 760 5598396 128

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002505.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vapb

Panther Classification:

Molecular Function -

membrane traffic protein membrane trafficking regulatory protein

Gene Ontology Categories:

Function(s) Process(es)

cellular calcium ion homeostasis
ER to Golgi vesicle-mediated transport
activation of signaling protein activity involved in unfolded protein response
endoplasmic reticulum organization
biological_process
modulation by virus of host morphology or physiology
endoplasmic reticulum unfolded protein response
negative regulation by host of viral release from host cell
positive regulation by host of viral release from host cell
negative regulation by host of viral genome replication
positive regulation by host of viral genome replication
positive regulation of viral genome replication
negative regulation by virus of viral protein levels in host cell
COPII-coated vesicle budding
molecular_function
microtubule binding
enzyme binding
FFAT motif binding
protein homodimerization activity
protein heterodimerization activity
beta-tubulin binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P117408 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P545129 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 46058 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 18030 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 404198 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 16578 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 53840 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 260724 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 287559 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 392036 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 662575 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 98368 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 325839 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 302825 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 850886 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 201981 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 563054 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 440768 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 239259 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 554766 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 775043 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 925854 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 113842 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 107806 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 546217 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 48067 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 6060 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 152057 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 21893 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P117408 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P117408 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P117408 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P492843 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700529157 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 13963 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 83573 - -
Agilent Rat cDNA Microarray (G4105A) 700529157 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10842627 - -
Affymetrix Rat Gene 1.0 ST Array 10842629 - -
Affymetrix Rat Gene 1.0 ST Array 10842626 - -
Affymetrix Rat Gene 1.0 ST Array 10842632 - -
Affymetrix Rat Gene 1.0 ST Array 10842625 - -
Affymetrix Rat Gene 1.0 ST Array 10842630 - -
Affymetrix Rat Gene 1.0 ST Array 10842631 - -
Affymetrix Rat Gene 1.0 ST Array 10842628 - -
Affymetrix Rat Gene 1.1 ST Array 10842624 - -
Rat Genome 230 2.0 Array 1369597_at - -
Rat Genome 230 2.0 Array 1390257_at - -
Rat Genome 230 2.0 Array 1390257_PM_at - -
Rat Genome 230 2.0 Array 1369597_PM_at - -
Affymetrix HT Rat Focus Array 1390257_PM_at - -
Affymetrix HT Rat Focus Array 1369597_PM_at - -
Affymetrix HT Rat Focus Array 1390257_at - -
Affymetrix HT Rat Focus Array 1369597_at - -
Affymetrix Rat Clariom S Assay PSR0300018486.rn.1 TC0300002505.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0300018487.rn.1 TC0300002505.rn.1 RTA TC
Rat Expression Set 230 1390257_PM_at - -
Rat Expression Set 230 1390257_at - -
Rat Expression Set 230 1369597_PM_at - -
Rat Expression Set 230 1369597_at - -
Affymetrix Rat Gene 1.0 ST Array 10842624 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22148950 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1366698 - -
RatRef-12 Expression BeadChip ILMN_60859 - -

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