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See other MSH5 GE Assays ›
Gene Symbol:
Msh5
Gene Name:
mutS homolog 5
Gene Aliases:
-
Chromosome Location:
Chr.20: 5020690 - 5037873 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01525817_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Msh5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_212536.2 NP_997701.2 12 - 13 1043 60
XM_006256057.2 XP_006256119.1 12 - 13 1870 60
XM_008772717.1 XP_008770939.1 11 - 12 2111 60
XM_008772718.1 XP_008770940.1 11 - 12 2174 60
GenBank mRNA BC083904.1 - 12 - 13 1043 7133915 60

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000001097.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Msh5

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

meiotic mismatch repair
meiosis I
synapsis
reciprocal meiotic recombination
female gamete generation
biological_process
homologous chromosome segregation
chiasma assembly
molecular_function
damaged DNA binding
ATP binding
DNA-dependent ATPase activity
mismatched DNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR2000009175.rn.1 TC2000001097.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000009176.rn.1 TC2000001097.rn.1 RTA TC

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