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Gene Symbol:
Tfe3
Gene Name:
transcription factor binding to IGHM enhancer 3
Gene Aliases:
RGD1559642, Tcfe3
Chromosome Location:
Chr.X: 15574579 - 15587807 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01525071_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tfe3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001271227.1 NP_001258156.1 6 - 7 1277 80
XM_006256721.2 XP_006256783.1 6 - 7 1922 80
XM_006256722.1 XP_006256784.1 5 - 6 1167 80
XM_006256723.2 XP_006256785.1 6 - 7 1243 80
XM_006256725.2 XP_006256787.1 6 - 7 936 80
XM_006256726.2 XP_006256788.1 6 - 7 886 80
XM_006256727.2 XP_006256789.1 6 - 7 1286 80
XM_006256728.2 XP_006256790.1 6 - 7 955 80
XM_006256729.2 XP_006256791.1 6 - 7 906 80

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00001501.rn.1

Set Membership:

Amplicon length between 71 and 85 Recommended Assay Rattus norvegicus Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

transcription from RNA polymerase II promoter
humoral immune response
biological_process
regulation of osteoclast differentiation
positive regulation of cell adhesion
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
molecular_function
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity
protein dimerization activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR0X00009577.rn.1 TC0X00001501.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00009576.rn.1 TC0X00001501.rn.1 RTA TC

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