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Gene Symbol:
Sgms2
Gene Name:
sphingomyelin synthase 2
Gene Aliases:
RGD1305778, spermatin
Chromosome Location:
Chr.2: 236458276 - 236481263 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01518654_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sgms2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001014043.1 NP_001014065.1 5 - 6 1314 86
XM_006233311.2 XP_006233373.1 6 - 7 2250 86
XM_008761501.1 XP_008759723.1 5 - 6 2166 86
GenBank mRNA BC085803.1 - 5 - 6 1314 7111151 86
DQ071571.2 - 4 - 5 885 86

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200004707.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sgms2

Gene Ontology Categories:

Function(s) Process(es)

sphingomyelin biosynthetic process
phosphorylation
kinase activity
sphingomyelin synthase activity
ceramide cholinephosphotransferase activity

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P286123 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 93921 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 522140 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 460903 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 53337 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 405418 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 188563 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 222887 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 110936 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 959052 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 838928 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 164736 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 361639 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 218155 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 255361 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 534669 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 188229 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 871267 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 159801 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 61593 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 148157 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P286123 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P286123 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P286123 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P286123 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 1452 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 95982 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 82599 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10826850 - -
Affymetrix Rat Gene 1.0 ST Array 10826847 - -
Affymetrix Rat Gene 1.0 ST Array 10826851 - -
Affymetrix Rat Gene 1.0 ST Array 10826854 - -
Affymetrix Rat Gene 1.0 ST Array 10826853 - -
Affymetrix Rat Gene 1.0 ST Array 10826849 - -
Affymetrix Rat Gene 1.0 ST Array 10826848 - -
Affymetrix Rat Gene 1.0 ST Array 10826852 - -
Affymetrix Rat Gene 1.1 ST Array 10826846 - -
Rat Genome 230 2.0 Array 1393919_at - -
Rat Genome 230 2.0 Array 1393919_PM_at - -
Affymetrix HT Rat Focus Array 1393919_PM_at - -
Affymetrix HT Rat Focus Array 1393919_at - -
Affymetrix Rat Clariom S Assay PSR0200032745.rn.1 TC0200004707.rn.1 RTA TC
Rat Expression Set 230 1393919_at - -
Rat Expression Set 230 1393919_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10826846 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21197198 - -

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