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Gene Symbol:
Batf
Gene Name:
basic leucine zipper transcription factor, ATF-like
Gene Aliases:
B-ATF
Chromosome Location:
Chr.6: 109562407 - 109584541 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01518024_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Batf
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001106748.1 NP_001100218.1 2 - 3 405 77
XM_008764758.1 XP_008762980.1 3 - 4 507 77

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600001198.rn.1

Set Membership:

Amplicon length between 71 and 85 3' Most Recommended Assay Rattus norvegicus 1700 Probe spans exons

Panther Classification:

Molecular Function -

basic leucine zipper transcription factor

Gene Ontology Categories:

Function(s) Process(es)

cytokine production
lymphoid progenitor cell differentiation
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
cellular response to DNA damage stimulus
biological_process
DNA damage response, signal transduction by p53 class mediator
defense response to protozoan
myeloid dendritic cell differentiation
T-helper 2 cell differentiation
isotype switching
positive regulation of transcription from RNA polymerase II promoter
hematopoietic stem cell differentiation
T-helper 17 cell differentiation
T-helper 17 cell lineage commitment
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
molecular_function
transcription factor activity, sequence-specific DNA binding
sequence-specific DNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P1001551 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 850031 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 101400 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 744319 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 718804 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 38571 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 641623 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 946061 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 263354 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 501219 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 328766 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 901800 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 122027 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 821647 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 25316 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 186237 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 971332 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 329191 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 102539 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 163762 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 156962 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1001551 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1001551 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P1001551 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1001551 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10886046 - -
Affymetrix Rat Gene 1.0 ST Array 10886048 - -
Affymetrix Rat Gene 1.0 ST Array 10886047 - -
Affymetrix Rat Gene 1.1 ST Array 10886040 - -
Rat Genome 230 2.0 Array 1382663_PM_at - -
Rat Genome 230 2.0 Array 1382663_at - -
Affymetrix HT Rat Focus Array 1382663_at - -
Affymetrix HT Rat Focus Array 1382663_PM_at - -
Affymetrix Rat Clariom S Assay PSR0600008483.rn.1 TC0600001198.rn.1 RTA TC
Rat Expression Set 230 1382663_at - -
Rat Expression Set 230 1382663_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10886040 - -
Rat Genome U34 Set rc_AA819819_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21055382 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1368018 - -

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