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Gene Symbol:
Lck
Gene Name:
LCK proto-oncogene, Src family tyrosine kinase
Gene Aliases:
Lck1, Lcktkr
Chromosome Location:
Chr.5: 147750976 - 147779624 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01516379_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Lck
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001100709.1 NP_001094179.1 8 - 9 970 71
XM_006238932.2 XP_006238994.1 9 - 10 1137 71
XM_006238933.2 XP_006238995.1 9 - 10 1099 71
XM_008764140.1 XP_008762362.1 9 - 10 1155 71
GenBank mRNA BC099218.1 - 4 - 5 574 71
BC160881.1 - 8 - 9 970 7381544 71

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003673.rn.1

Set Membership:

Amplicon length between 71 and 85 Protein Kinase Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

protein phosphorylation
cellular zinc ion homeostasis
apoptotic process
activation of cysteine-type endopeptidase activity involved in apoptotic process
cell surface receptor signaling pathway
transmembrane receptor protein tyrosine kinase signaling pathway
aging
response to mechanical stimulus
response to metal ion
response to zinc ion
positive regulation of gene expression
dephosphorylation
peptidyl-tyrosine phosphorylation
T cell differentiation
peptidyl-tyrosine autophosphorylation
regulation of cell proliferation
response to drug
positive regulation of tyrosine phosphorylation of Stat5 protein
response to hydrogen peroxide
regulation of apoptotic process
innate immune response
positive regulation of gamma-delta T cell differentiation
protein autophosphorylation
B cell receptor signaling pathway
regulation of T cell receptor signaling pathway
positive regulation of T cell receptor signaling pathway
positive regulation of T cell activation
release of sequestered calcium ion into cytosol
positive regulation of uterine smooth muscle contraction
cellular response to peptide hormone stimulus
positive regulation of intrinsic apoptotic signaling pathway
glycoprotein binding
antigen binding
protein tyrosine kinase activity
non-membrane spanning protein tyrosine kinase activity
protein serine/threonine phosphatase activity
receptor binding
ATP binding
protein C-terminus binding
protein kinase binding
protein phosphatase binding
protein complex binding
SH2 domain binding
CD4 receptor binding
CD8 receptor binding
identical protein binding
phosphatidylinositol 3-kinase binding
ATPase binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P511304 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 921531 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 172275 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 795198 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 879215 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 523965 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 624877 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 100748 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 117539 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P511304 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P511304 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P511304 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P511304 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10880044 - -
Affymetrix Rat Gene 1.0 ST Array 10880035 - -
Affymetrix Rat Gene 1.0 ST Array 10880045 - -
Affymetrix Rat Gene 1.0 ST Array 10880038 - -
Affymetrix Rat Gene 1.0 ST Array 10880039 - -
Affymetrix Rat Gene 1.0 ST Array 10880042 - -
Affymetrix Rat Gene 1.0 ST Array 10880040 - -
Affymetrix Rat Gene 1.0 ST Array 10880036 - -
Affymetrix Rat Gene 1.0 ST Array 10880041 - -
Affymetrix Rat Gene 1.0 ST Array 10880034 - -
Affymetrix Rat Gene 1.0 ST Array 10880043 - -
Affymetrix Rat Gene 1.1 ST Array 10880033 - -
Rat Genome 230 2.0 Array 1383320_at - -
Rat Genome 230 2.0 Array 1383320_PM_at - -
Affymetrix HT Rat Focus Array 1383320_PM_at - -
Affymetrix HT Rat Focus Array 1383320_at - -
Affymetrix Rat Clariom S Assay PSR0500027388.rn.1 TC0500003673.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0500027386.rn.1 TC0500003673.rn.1 RTA TC
Rat Expression Set 230 1383320_at - -
Rat Expression Set 230 1383320_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10880033 - -
Rat Genome U34 Set rc_AA800684_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21440771 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1356341 - -

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