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See other ATG13 GE Assays ›
Gene Symbol:
Atg13
Gene Name:
autophagy related 13
Gene Aliases:
Harbi1, Harbi1l, RGD1310685
Chromosome Location:
Chr.3: 80580549 - 80614554 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01513987_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Atg13
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001271212.1 NP_001258141.1 6 - 7 754 69
GenBank mRNA FQ217242.1 - 756 69

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300003666.rn.1

Set Membership:

Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

autophagosome assembly
biological_process
molecular_function
protein kinase binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P956951 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P080652 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P080652 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P080652 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P080652 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P227267 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P956951 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10847425 - -
Affymetrix Rat Gene 1.0 ST Array 10847409 - -
Affymetrix Rat Gene 1.0 ST Array 10847424 - -
Rat Genome 230 2.0 Array 1388336_PM_at - -
Rat Genome 230 2.0 Array 1388336_at - -
Affymetrix Rat Clariom S Assay PSR0300027849.rn.1 TC0300003666.rn.1 RTA TC
Rat Expression Set 230 1388336_at - -
Rat Expression Set 230 1388336_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10847408 - -
Rat Genome U34 Set rc_AA799537_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21678085 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1364978 - -
RatRef-12 Expression BeadChip ILMN_57019 - -

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