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Gene Symbol:
Spi1
Gene Name:
Spi-1 proto-oncogene
Gene Aliases:
Pu.1, Sfpi1
Chromosome Location:
Chr.3: 79918135 - 79937708 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01513815_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Spi1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001005892.2 NP_001005892.1 4 - 5 654 62
XM_006234532.2 XP_006234594.1 4 - 5 1533 62
GenBank mRNA AB154364.1 - 4 - 5 517 62
BC091185.1 - 4 - 5 654 7366435 62

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300001127.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Spi1

Panther Classification:

Molecular Function -

winged helix/forkhead transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
vasculature development
lymphoid progenitor cell differentiation
myeloid leukocyte differentiation
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
lymphocyte differentiation
cell differentiation
erythrocyte differentiation
macrophage differentiation
granulocyte differentiation
somatic stem cell population maintenance
myeloid dendritic cell differentiation
histone H3 acetylation
hypermethylation of CpG island
negative regulation of MHC class II biosynthetic process
regulation of erythrocyte differentiation
negative regulation of gene expression, epigenetic
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
anatomical structure regression
cellular response to ethanol
negative regulation of histone H4 acetylation
apoptotic process involved in patterning of blood vessels
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
core promoter binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription factor binding
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
sequence-specific DNA binding
NFAT protein binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P433783 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 32142 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 809978 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 350687 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 696128 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 46283 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 811992 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 959553 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 70987 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 770236 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 588619 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 888835 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 196703 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 718067 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 137579 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 62204 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P433783 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P433783 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P433783 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P433783 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 77081 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 14113 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10837798 - -
Affymetrix Rat Gene 1.0 ST Array 10837795 - -
Affymetrix Rat Gene 1.0 ST Array 10837799 - -
Affymetrix Rat Gene 1.0 ST Array 10837797 - -
Affymetrix Rat Gene 1.0 ST Array 10837800 - -
Affymetrix Rat Gene 1.0 ST Array 10837796 - -
Affymetrix Rat Gene 1.1 ST Array 10837794 - -
Affymetrix Rat Clariom S Assay PSR0300007875.rn.1 TC0300001127.rn.1 RTA TC
Affymetrix Rat Gene 1.0 ST Array 10837794 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21902112 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1651146 - -
RatRef-12 Expression BeadChip ILMN_54334 - -

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