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Gene Symbol:
Tjap1
Gene Name:
tight junction associated protein 1
Gene Aliases:
Tjp4
Chromosome Location:
Chr.9: 17086456 - 17110770 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01512061_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tjap1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001108203.1 NP_001101673.1 8 - 9 788 61
XM_006244524.2 XP_006244586.1 7 - 8 754 61
XM_006244525.2 XP_006244587.1 7 - 8 751 61
XM_006244526.2 XP_006244588.1 6 - 7 624 61
XM_006244527.2 XP_006244589.1 6 - 7 656 61
XM_006244528.2 XP_006244590.1 6 - 7 653 61
XM_006244529.2 XP_006244591.1 5 - 6 526 61
XM_006244530.2 XP_006244592.1 5 - 6 523 61
XM_006244532.2 XP_006244594.1 6 - 7 651 61
XM_006244533.2 XP_006244595.1 5 - 6 521 61
XM_006244534.2 XP_006244596.1 7 - 8 754 61
XM_006244535.2 XP_006244597.1 5 - 6 1049 61
GenBank mRNA FQ221753.1 - 5 - 6 1030 61
FQ221813.1 - 5 - 6 1419 61

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900000234.rn.1

Set Membership:

Amplicon length less than or equal to 70 Detect Genomic DNA Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Panther Classification:

Molecular Function -

tight junction

Gene Ontology Categories:

Function(s)

Golgi organization

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P146567 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 890593 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 824367 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 221137 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 381388 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 365568 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 233252 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 786516 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 910849 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 205019 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 578910 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 375736 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 402864 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 207502 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 30603 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 894772 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 742262 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 222543 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 486051 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 328751 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 304084 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 86828 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 52788 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 175635 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 130639 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 74250 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 25102 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 413 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 89039 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P146567 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P146567 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P146567 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P20452 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 85544 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 49399 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10921732 - -
Affymetrix Rat Gene 1.0 ST Array 10921735 - -
Affymetrix Rat Gene 1.0 ST Array 10921736 - -
Affymetrix Rat Gene 1.0 ST Array 10921738 - -
Affymetrix Rat Gene 1.0 ST Array 10921730 - -
Affymetrix Rat Gene 1.0 ST Array 10921729 - -
Affymetrix Rat Gene 1.0 ST Array 10921740 - -
Affymetrix Rat Gene 1.0 ST Array 10921734 - -
Affymetrix Rat Gene 1.0 ST Array 10921739 - -
Affymetrix Rat Gene 1.0 ST Array 10921733 - -
Affymetrix Rat Gene 1.1 ST Array 10921727 - -
Rat Genome 230 2.0 Array 1375865_at - -
Rat Genome 230 2.0 Array 1375865_PM_at - -
Affymetrix HT Rat Focus Array 1375865_at - -
Affymetrix HT Rat Focus Array 1375865_PM_at - -
Affymetrix Rat Clariom S Assay PSR0900002098.rn.1 TC0900000234.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900002090.rn.1 TC0900000234.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900002093.rn.1 TC0900000234.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0900002097.rn.1 TC0900000234.rn.1 RTA TC
Rat Expression Set 230 1375865_at - -
Rat Expression Set 230 1375865_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10921727 - -
Rat Genome U34 Set rc_AI044385_at - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1374474 - -

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