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See other APOBEC3B GE Assays ›
Gene Symbol:
Apobec3b
Gene Name:
apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
Gene Aliases:
Apobec3, Apobec3f
Chromosome Location:
Chr.7: 121108114 - 121128346 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01505455_m1
Size
Availability Inventoried
Catalog # 4331182
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Apobec3b
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001033703.1 NP_001028875.1 1 - 2 144 97
XM_008765716.1 XP_008763938.1 1 - 2 1280 97
GenBank mRNA BC101878.1 - 1 - 2 144 7929998 97

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001464.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apobec3b

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)

hematopoietic progenitor cell differentiation
metabolic process
negative regulation of transposition
negative regulation of viral genome replication
innate immune response
defense response to virus
zinc ion binding
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
poly(A) RNA binding
deoxycytidine deaminase activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P415193 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 573068 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 135267 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 172219 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 861158 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 358463 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 302679 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 179463 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 453203 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 491843 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 489258 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 285049 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 649898 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 935312 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 60665 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 162977 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 140079 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 69821 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P415193 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P415193 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P415193 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P415193 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 103026 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 19918 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10897733 - -
Affymetrix Rat Gene 1.0 ST Array 10897724 - -
Affymetrix Rat Gene 1.0 ST Array 10897727 - -
Affymetrix Rat Gene 1.0 ST Array 10897732 - -
Affymetrix Rat Gene 1.0 ST Array 10897728 - -
Affymetrix Rat Gene 1.0 ST Array 10897725 - -
Affymetrix Rat Gene 1.0 ST Array 10897726 - -
Affymetrix Rat Gene 1.0 ST Array 10897730 - -
Affymetrix Rat Gene 1.0 ST Array 10897731 - -
Affymetrix Rat Gene 1.1 ST Array 10897723 - -
Rat Genome 230 2.0 Array 1392810_at - -
Rat Genome 230 2.0 Array 1392810_PM_at - -
Affymetrix HT Rat Focus Array 1392810_PM_at - -
Affymetrix HT Rat Focus Array 1392810_at - -
Affymetrix Rat Clariom S Assay PSR0700010973.rn.1 TC0700001464.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0700010972.rn.1 TC0700001464.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0700010974.rn.1 TC0700001464.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0700010971.rn.1 TC0700001464.rn.1 RTA TC
Rat Expression Set 230 1392810_PM_at - -
Rat Expression Set 230 1392810_at - -
Affymetrix Rat Gene 1.0 ST Array 10897723 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22001644 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1353663 - -

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