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See other SIGIRR GE Assays ›
Gene Symbol:
Sigirr
Gene Name:
single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
Gene Aliases:
RGD1306732
Chromosome Location:
Chr.1: 213898393 - 213907205 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01501616_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sigirr
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001024887.1 NP_001020058.1 8 - 9 1075 72
XM_006230552.2 XP_006230614.1 8 - 9 1909 72
XM_006230553.2 XP_006230615.1 8 - 9 1541 72
XM_008759988.1 XP_008758210.1 7 - 8 3107 72
XM_008759989.1 XP_008758211.1 8 - 9 1600 72
XM_008759990.1 XP_008758212.1 8 - 9 1103 72
GenBank mRNA BC097488.1 - 8 - 9 1075 7460323 72

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006922.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sigirr

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of cytokine-mediated signaling pathway
acute-phase response
signal transduction
biological_process
negative regulation of sequence-specific DNA binding transcription factor activity
negative regulation of chemokine biosynthetic process
molecular_function

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P1058570 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 284167 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 261815 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 687937 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 470431 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 639028 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 803898 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 320408 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 177851 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1058570 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1058570 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P1058570 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1058570 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 24758 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10726695 - -
Affymetrix Rat Gene 1.0 ST Array 10726696 - -
Affymetrix Rat Gene 1.0 ST Array 10726698 - -
Affymetrix Rat Gene 1.0 ST Array 10726693 - -
Affymetrix Rat Gene 1.0 ST Array 10726700 - -
Affymetrix Rat Gene 1.0 ST Array 10726699 - -
Affymetrix Rat Gene 1.0 ST Array 10726694 - -
Affymetrix Rat Gene 1.0 ST Array 10726692 - -
Affymetrix Rat Gene 1.0 ST Array 10726697 - -
Affymetrix Rat Gene 1.0 ST Array 10726701 - -
Affymetrix Rat Gene 1.1 ST Array 10726691 - -
Rat Genome 230 2.0 Array 1378605_at - -
Rat Genome 230 2.0 Array 1378605_PM_at - -
Affymetrix HT Rat Focus Array 1378605_at - -
Affymetrix HT Rat Focus Array 1378605_PM_at - -
Affymetrix Rat Clariom S Assay PSR0100054486.rn.1 TC0100006922.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0100054488.rn.1 TC0100006922.rn.1 RTA TC
Rat Expression Set 230 1378605_PM_at - -
Rat Expression Set 230 1378605_at - -
Affymetrix Rat Gene 1.0 ST Array 10726691 - -
Rat Genome U34 Set rc_AA818702_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21977863 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1352630 - -

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