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See other PCDH11X GE Assays ›
Gene Symbol:
Pcdh11x
Gene Name:
protocadherin 11 X-linked
Gene Aliases:
RGD1562864
Chromosome Location:
Chr.X: 92596314 - 93341412 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01497468_m1
Size
Availability Inventoried
Catalog # 4331182
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Pcdh11x
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001271228.1 NP_001258157.1 2 - 3 903 95
XM_008773375.1 XP_008771597.1 2 - 3 950 95

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00000822.rn.1

Set Membership:

Amplicon length between 86 and 100 Rattus norvegicus 1700 Inventoried Probe spans exons

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Function(s) Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
negative regulation of phosphatase activity
calcium ion binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P165541 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P165548 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165548 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165541 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165541 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165548 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P165541 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P165548 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P550938 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P218059 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10934791 - -
Affymetrix Rat Gene 1.0 ST Array 10934783 - -
Affymetrix Rat Gene 1.1 ST Array 10934782 - -
Affymetrix Rat Clariom S Assay PSR0X00004950.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00004946.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00004948.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00004949.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00004947.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Gene 1.0 ST Array 10934782 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21629300 - -
ABI Rat Genome Survey Microarray 21662959 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1364916 - -
RatRef-12 Expression BeadChip ILMN_69729 - -

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