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See other PCDH11X GE Assays ›
Gene Symbol:
Pcdh11x
Gene Name:
protocadherin 11 X-linked
Gene Aliases:
RGD1562864
Chromosome Location:
Chr.X: 92596314 - 93341412 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01497298_s1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Pcdh11x
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001271228.1 NP_001258157.1 9 4333 133
XM_008773375.1 XP_008771597.1 9 4380 133

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Amplicon length greater than or equal to 101 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Function(s) Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
negative regulation of phosphatase activity
calcium ion binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P165541 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P165548 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165541 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165548 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165548 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165541 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P165541 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P165548 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P218059 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P550938 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10934783 - -
Affymetrix Rat Gene 1.0 ST Array 10934791 - -
Affymetrix Rat Gene 1.1 ST Array 10934782 - -
Affymetrix Rat Clariom S Assay PSR0X00004964.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00004952.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00004954.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00004957.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00004955.rn.1 TC0X00000822.rn.1 RTA TC
Affymetrix Rat Gene 1.0 ST Array 10934782 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21629300 - -
ABI Rat Genome Survey Microarray 21662959 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1364916 - -
RatRef-12 Expression BeadChip ILMN_69729 - -

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