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Gene Symbol:
Msr1
Gene Name:
macrophage scavenger receptor 1
Gene Aliases:
RGD1564316
Chromosome Location:
Chr.16: 56817714 - 56900024 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01488115_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Msr1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001191939.1 NP_001178868.1 1 - 2 104 62
XM_006253206.2 XP_006253268.1 2 - 3 293 62
XM_006253207.2 XP_006253269.1 2 - 3 288 62

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600001725.rn.1

Set Membership:

Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)

receptor-mediated endocytosis
positive regulation of macrophage derived foam cell differentiation
positive regulation of cholesterol storage
cholesterol transport
plasma lipoprotein particle clearance
lipoprotein transport
cellular response to organic cyclic compound
molecular_function
scavenger receptor activity
low-density lipoprotein particle binding

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P928825 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P928825 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P928825 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P928825 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P928825 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR1600012896.rn.1 TC1600001725.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1600012895.rn.1 TC1600001725.rn.1 RTA TC
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1355078 - -
RatRef-12 Expression BeadChip ILMN_54304 - -

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