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See other HACD1 GE Assays ›
Gene Symbol:
Hacd1
Gene Name:
3-hydroxyacyl-CoA dehydratase 1
Gene Aliases:
Ptpla
Chromosome Location:
Chr.17: 81173238 - 81196012 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01487700_g1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Hacd1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001101001.1 NP_001094471.1 3 - 4 357 159
XM_006254292.2 XP_006254354.1 2 - 3 1030 159
XM_006254293.2 XP_006254355.1 2 - 3 1031 159
GenBank mRNA AM260199.1 - 3 - 4 357 159

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1700002258.rn.1

Additional Information:

This assay is in the 5'UTR region of the XM_006254292.2,XM_006254293.2 transcripts.

Set Membership:

Amplicon length greater than or equal to 101 Protein Phosphatase Detect Genomic DNA Rattus norvegicus Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

regulation of G2/M transition of mitotic cell cycle
positive regulation of cell-substrate adhesion
myotube differentiation
sphingolipid biosynthetic process
fatty acid elongation
cellular macromolecular complex assembly
very long-chain fatty acid biosynthetic process
cementum mineralization
regulation of G1/S transition of mitotic cell cycle
3-hydroxyacyl-CoA dehydratase activity
enzyme binding
hydroxyapatite binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR1700015250.rn.1 TC1700002258.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1700015249.rn.1 TC1700002258.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1700015257.rn.1 TC1700002258.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1700015245.rn.1 TC1700002258.rn.1 RTA TC

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