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Gene Symbol:
Smarce1
Gene Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Gene Aliases:
BAF57, RGD1304726
Chromosome Location:
Chr.10: 87116827 - 87138248 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01466623_gH
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smarce1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001024993.1 NP_001020164.1 6 - 7 534 82
XM_008768051.1 XP_008766273.1 6 - 7 876 82
GenBank mRNA BC091314.1 - 6 - 7 590 7312354 82
BC092210.1 - 6 - 7 534 7311688 82
FQ213000.1 - 6 - 7 522 82

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smarce1

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Function(s) Process(es)

nucleosome disassembly
chromatin remodeling
regulation of transcription, DNA-templated
spermatid development
brain development
metabolic process
ATP-dependent chromatin remodeling
negative regulation of transcription, DNA-templated
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
DNA binding
chromatin binding
RNA binding
N-acetyltransferase activity
ligand-dependent nuclear receptor binding
nucleosomal DNA binding
protein N-terminus binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P157144 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P157149 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 911815 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 275419 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 746906 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 683874 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 604528 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 339972 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 635634 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 182875 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 170537 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 919003 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 601130 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 17210 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 696272 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 278285 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 90479 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 139713 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 56392 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P157144 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P157149 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P157144 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P157149 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P157144 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P157149 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P755445 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 866 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 15626 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10747031 - -
Affymetrix Rat Gene 1.0 ST Array 10747034 - -
Affymetrix Rat Gene 1.0 ST Array 10747033 - -
Affymetrix Rat Gene 1.0 ST Array 10747030 - -
Affymetrix Rat Gene 1.0 ST Array 10810408 - -
Affymetrix Rat Gene 1.0 ST Array 10747032 - -
Affymetrix Rat Gene 1.1 ST Array 10810407 - -
Affymetrix Rat Gene 1.1 ST Array 10747029 - -
Rat Genome 230 2.0 Array 1383806_PM_at - -
Rat Genome 230 2.0 Array 1378203_PM_at - -
Rat Genome 230 2.0 Array 1378203_at - -
Rat Genome 230 2.0 Array 1372938_at - -
Rat Genome 230 2.0 Array 1383806_at - -
Rat Genome 230 2.0 Array 1372938_PM_at - -
Affymetrix HT Rat Focus Array 1372938_at - -
Affymetrix HT Rat Focus Array 1378203_PM_at - -
Affymetrix HT Rat Focus Array 1372938_PM_at - -
Affymetrix HT Rat Focus Array 1378203_at - -
Affymetrix HT Rat Focus Array 1383806_at - -
Affymetrix HT Rat Focus Array 1383806_PM_at - -
Affymetrix Rat Clariom S Assay PSR1000033430.rn.1 TC1000003732.rn.1 RTA TC
Rat Expression Set 230 1372938_PM_at - -
Rat Expression Set 230 1372938_at - -
Rat Expression Set 230 1378203_at - -
Rat Expression Set 230 1378203_PM_at - -
Rat Expression Set 230 1383806_at - -
Rat Expression Set 230 1383806_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10747029 - -
Affymetrix Rat Gene 1.0 ST Array 10810407 - -
Rat Genome U34 Set rc_AI010410_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 20694107 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1355392 - -

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