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See other S100A16 GE Assays ›
Gene Symbol:
S100a16
Gene Name:
S100 calcium binding protein A16
Gene Aliases:
-
Chromosome Location:
Chr.2: 189923140 - 189928850 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01458849_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: S100a16
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001108557.2 NP_001102027.1 2 - 3 222 73
XM_006232717.2 XP_006232779.1 2 - 3 296 73
XM_006232718.1 XP_006232780.1 2 - 3 213 73
GenBank mRNA BC158598.1 - 2 - 3 222 7127572 73
FQ209774.1 - 2 - 3 224 73
FQ214291.1 - 2 - 3 205 73
FQ214430.1 - 2 - 3 218 73
FQ229313.1 - 2 - 3 230 73

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001614.rn.1

Set Membership:

Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Probe spans exons

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Function(s) Process(es)

response to calcium ion
calcium ion binding
protein homodimerization activity
poly(A) RNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P396123 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 530464 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 781841 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 107647 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P396123 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P396123 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P396123 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P396123 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 10 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10817049 - -
Affymetrix Rat Gene 1.0 ST Array 10817048 - -
Affymetrix Rat Gene 1.1 ST Array 10817046 - -
Rat Genome 230 2.0 Array 1388356_at - -
Rat Genome 230 2.0 Array 1388356_PM_at - -
Affymetrix HT Rat Focus Array 1388356_PM_at - -
Affymetrix HT Rat Focus Array 1388356_at - -
Affymetrix Rat Clariom S Assay PSR0200010830.rn.1 TC0200001614.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200010831.rn.1 TC0200001614.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200010832.rn.1 TC0200001614.rn.1 RTA TC
Rat Expression Set 230 1388356_PM_at - -
Rat Expression Set 230 1388356_at - -
Affymetrix Rat Gene 1.0 ST Array 10817046 - -
Rat Genome U34 Set rc_AI011560_f_at - -
Rat Genome U34 Set rc_AI171314_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21236595 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1649818 - -

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