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See other S100A1 GE Assays ›
Gene Symbol:
S100a1
Gene Name:
S100 calcium binding protein A1
Gene Aliases:
-
Chromosome Location:
Chr.2: 189900505 - 189905878 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01458753_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: S100a1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001007636.2 NP_001007637.1 1 - 2 140 68
XM_006232603.2 XP_006232665.1 2 - 3 824 68
GenBank mRNA S68809.1 - 1 - 2 110 68

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200004105.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene S100a1

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
regulation of heart contraction
substantia nigra development
positive regulation of voltage-gated calcium channel activity
calcium ion binding
protein binding
identical protein binding
protein homodimerization activity
S100 protein binding
calcium-dependent protein binding
ATPase binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P259957 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 266040 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 358101 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 76853 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P259957 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P259957 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P259957 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P15752 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P259957 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 702030829 - -
Agilent Rat cDNA Microarray (G4105A) 702030829 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10824690 - -
Affymetrix Rat Gene 1.0 ST Array 10824691 - -
Affymetrix Rat Gene 1.1 ST Array 10824689 - -
Rat Genome 230 2.0 Array 1388456_PM_at - -
Rat Genome 230 2.0 Array 1388456_at - -
Affymetrix HT Rat Focus Array 1388456_PM_at - -
Affymetrix HT Rat Focus Array 1388456_at - -
Affymetrix Rat Clariom S Assay PSR0200028133.rn.1 TC0200004105.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200028134.rn.1 TC0200004105.rn.1 RTA TC
Rat Expression Set 230 1388456_at - -
Rat Expression Set 230 1388456_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10824689 - -
Rat Genome U34 Set rc_AI228548_g_at - -
Rat Genome U34 Set S68809_s_at - -
Rat Genome U34 Set U26356mRNA_s_at - -
Rat Genome U34 Set rc_AI228548_at - -
Rat Genome U34 Set S68809_s_at - -
Rat Genome U34 Set rc_AI228548_g_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21767744 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1376604 - -

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