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Gene Symbol:
Bckdha
Gene Name:
branched chain ketoacid dehydrogenase E1, alpha polypeptide
Gene Aliases:
BCKDA, E1a
Chromosome Location:
Chr.1: 82423291 - 82452057 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01457724_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Bckdha
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_012782.1 NP_036914.1 5 - 6 653 94
GenBank mRNA BC089915.1 - 3 - 4 300 94
BC161819.1 - 5 - 6 658 9099948 94
J02827.1 - 5 - 6 637 94

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005001.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Bckdha

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Function(s) Process(es)

response to nutrient
branched-chain amino acid catabolic process
response to glucocorticoid
response to cAMP
oxidation-reduction process
alpha-ketoacid dehydrogenase activity
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
protein complex binding
metal ion binding
2-oxoisovalerate dehydrogenase (acylating) activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P15665 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 456180 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 121102 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 519228 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 583775 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 258535 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 591506 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 639025 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 168531 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 459515 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 691276 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 415469 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 788842 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 776300 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 349247 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 832236 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 628281 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 634502 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 869814 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 403957 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 171265 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 59864 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 44932 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15665 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15665 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P15665 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P15665 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700251752 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 68172 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 64151 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 94975 - -
Agilent Rat cDNA Microarray (G4105A) 700251752 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10719869 - -
Affymetrix Rat Gene 1.0 ST Array 10719866 - -
Affymetrix Rat Gene 1.0 ST Array 10719865 - -
Affymetrix Rat Gene 1.0 ST Array 10719867 - -
Affymetrix Rat Gene 1.0 ST Array 10719872 - -
Affymetrix Rat Gene 1.0 ST Array 10719870 - -
Affymetrix Rat Gene 1.0 ST Array 10719871 - -
Affymetrix Rat Gene 1.0 ST Array 10719868 - -
Affymetrix Rat Gene 1.0 ST Array 10719864 - -
Affymetrix Rat Gene 1.1 ST Array 10719863 - -
Rat Genome 230 2.0 Array 1380557_at - -
Rat Genome 230 2.0 Array 1380557_PM_at - -
Rat Genome 230 2.0 Array 1382828_at - -
Rat Genome 230 2.0 Array 1382828_PM_at - -
Rat Genome 230 2.0 Array 1370897_at - -
Rat Genome 230 2.0 Array 1370897_PM_at - -
Affymetrix HT Rat Focus Array 1380557_PM_at - -
Affymetrix HT Rat Focus Array 1370897_PM_at - -
Affymetrix HT Rat Focus Array 1370897_at - -
Affymetrix HT Rat Focus Array 1380557_at - -
Affymetrix Rat Clariom S Assay PSR0100039707.rn.1 TC0100005001.rn.1 RTA TC
Rat Expression Set 230 1370897_PM_at - -
Rat Expression Set 230 1370897_at - -
Rat Expression Set 230 1380557_at - -
Rat Expression Set 230 1382828_PM_at - -
Rat Expression Set 230 1382828_at - -
Rat Expression Set 230 1380557_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10719863 - -
Rat Genome U34 Set J02827_g_at - -
Rat Genome U34 Set J02827_at - -
Rat Genome U34 Set rc_AA851950_at - -
Rat Genome U34 Set rc_AI145529_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21558354 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1371691 - -

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