Sema3f
Genomic Map
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| Gene Symbol: Sema3f | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001108185.1 | NP_001101655.1 | 18 - 19 | 2156 | 67 | |
| XM_006243778.2 | XP_006243840.1 | 18 - 19 | 2711 | 67 | ||
| XM_008766532.1 | XP_008764754.1 | 18 - 19 | 2039 | 67 | ||
| XM_008766533.1 | XP_008764755.1 | 15 - 16 | 3000 | 67 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0800003357.rn.1Set Membership: |
Amplicon length less than or equal to 70
3' Most
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
neural crest cell migration
axon guidance
facial nerve structural organization
trigeminal nerve structural organization
nerve development
branchiomotor neuron axon guidance
ventral trunk neural crest cell migration
negative regulation of axon extension involved in axon guidance
axon extension involved in axon guidance
negative chemotaxis
sympathetic ganglion development
sympathetic neuron projection extension
sympathetic neuron projection guidance
neural crest cell migration involved in autonomic nervous system development
semaphorin-plexin signaling pathway involved in neuron projection guidance
semaphorin-plexin signaling pathway involved in axon guidance
receptor activity
chemorepellent activity
neural crest cell migration
axon guidance
facial nerve structural organization
trigeminal nerve structural organization
nerve development
branchiomotor neuron axon guidance
ventral trunk neural crest cell migration
negative regulation of axon extension involved in axon guidance
axon extension involved in axon guidance
negative chemotaxis
sympathetic ganglion development
sympathetic neuron projection extension
sympathetic neuron projection guidance
neural crest cell migration involved in autonomic nervous system development
semaphorin-plexin signaling pathway involved in neuron projection guidance
semaphorin-plexin signaling pathway involved in axon guidance
receptor activity
chemorepellent activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P131697 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 248626 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 542328 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 279564 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 938105 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 756417 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 333680 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 450231 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 873740 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 301901 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 359064 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 737813 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 532711 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 21316 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 580490 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 113982 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 525724 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 374522 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 752008 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 972082 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 140075 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 795522 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 193497 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 662858 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 893872 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 169139 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 98088 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 109642 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 165865 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P131697 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P131697 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P131697 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_42_P689410 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10920159 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920165 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920168 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920161 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920169 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920155 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920166 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920151 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920162 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920157 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920164 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920163 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920156 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920158 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920150 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920160 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920152 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920149 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920167 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920154 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920153 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10920148 | - | - |
| Rat Genome 230 2.0 Array | 1380851_at | - | - |
| Rat Genome 230 2.0 Array | 1377892_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1380851_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1377892_at | - | - |
| Affymetrix HT Rat Focus Array | 1377892_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1380851_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1377892_at | - | - |
| Affymetrix HT Rat Focus Array | 1380851_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0800027153.rn.1 | TC0800003357.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0800027155.rn.1 | TC0800003357.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0800027154.rn.1 | TC0800003357.rn.1 | RTA TC |
| Rat Expression Set 230 | 1377892_PM_at | - | - |
| Rat Expression Set 230 | 1377892_at | - | - |
| Rat Expression Set 230 | 1380851_PM_at | - | - |
| Rat Expression Set 230 | 1380851_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10920148 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21032324 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1352572 | - | - |
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