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See other H2AFY GE Assays ›
Gene Symbol:
H2afy
Gene Name:
H2A histone family, member Y
Gene Aliases:
-
Chromosome Location:
Chr.17: 9282106 - 9344698 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01441738_m1
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: H2afy
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_017182.2 NP_058878.1 7 - 8 958 73
XM_006253573.2 XP_006253635.1 7 - 8 996 73
XM_006253574.2 XP_006253636.1 7 - 8 1086 73
XM_006253575.2 XP_006253637.1 7 - 8 987 73
XM_006253576.2 XP_006253638.1 7 - 8 984 73
XM_006253577.2 XP_006253639.1 7 - 8 996 73
GenBank mRNA BC089093.1 - 7 - 8 958 7126329 73
M99065.2 - 6 - 7 799 73
U79139.1 - 7 - 8 903 73

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1700000146.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene H2afy

Panther Classification:

Molecular Function -

histone

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
regulation of cell growth
nucleosome assembly
dosage compensation
biological_process
chromatin modification
negative regulation of histone phosphorylation
negative regulation of gene expression, epigenetic
regulation of chromatin silencing at rDNA
establishment of protein localization to chromatin
negative regulation of protein serine/threonine kinase activity
negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter
negative regulation of cell cycle G2/M phase transition
rDNA binding
molecular_function
chromatin binding
double-stranded methylated DNA binding
protein kinase binding
protein serine/threonine kinase inhibitor activity
chromatin DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR1700001117.rn.1 TC1700000146.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1700001118.rn.1 TC1700000146.rn.1 RTA TC

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