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See other CDK9 GE Assays ›
Gene Symbol:
Cdk9
Gene Name:
cyclin-dependent kinase 9
Gene Aliases:
-
Chromosome Location:
Chr.3: 11742269 - 11747117 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01436064_m1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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200.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Cdk9
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001007743.1 NP_001007744.1 6 - 7 800 77
GenBank mRNA BC082037.1 - 6 - 7 800 7130973 77

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002879.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Protein Kinase Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cdk9

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Function(s) Process(es)

DNA repair
regulation of DNA repair
transcription, DNA-templated
regulation of transcription, DNA-templated
protein phosphorylation
regulation of mitotic cell cycle
positive regulation of cardiac muscle hypertrophy
regulation of histone modification
positive regulation of histone phosphorylation
response to drug
replication fork arrest
positive regulation of transcription from RNA polymerase II promoter
negative regulation of cell cycle arrest
cellular response to cytokine stimulus
negative regulation of mRNA polyadenylation
positive regulation of mRNA 3'-UTR binding
positive regulation of histone H2B ubiquitination
DNA binding
chromatin binding
cyclin-dependent protein serine/threonine kinase activity
ATP binding
transcription factor binding
RNA polymerase II carboxy-terminal domain kinase activity
snRNA binding
transcription regulatory region DNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P137962 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 176247 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 453806 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 703328 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 861334 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P137962 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P137962 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P137962 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P137962 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P19318 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 70774 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10844356 - -
Affymetrix Rat Gene 1.0 ST Array 10844359 - -
Affymetrix Rat Gene 1.0 ST Array 10844361 - -
Affymetrix Rat Gene 1.0 ST Array 10844360 - -
Affymetrix Rat Gene 1.0 ST Array 10844357 - -
Affymetrix Rat Gene 1.0 ST Array 10844362 - -
Affymetrix Rat Gene 1.0 ST Array 10844358 - -
Affymetrix Rat Gene 1.1 ST Array 10844355 - -
Rat Genome 230 2.0 Array 1376491_PM_a_at - -
Rat Genome 230 2.0 Array 1372759_PM_at - -
Rat Genome 230 2.0 Array 1372759_at - -
Rat Genome 230 2.0 Array 1376491_a_at - -
Affymetrix HT Rat Focus Array 1372759_at - -
Affymetrix HT Rat Focus Array 1376491_PM_a_at - -
Affymetrix HT Rat Focus Array 1372759_PM_at - -
Affymetrix HT Rat Focus Array 1376491_a_at - -
Affymetrix Rat Clariom S Assay PSR0300022239.rn.1 TC0300002879.rn.1 RTA TC
Rat Expression Set 230 1372759_PM_at - -
Rat Expression Set 230 1376491_a_at - -
Rat Expression Set 230 1372759_at - -
Rat Expression Set 230 1376491_PM_a_at - -
Affymetrix Rat Gene 1.0 ST Array 10844355 - -
Rat Genome U34 Set rc_AI008615_at - -
Rat Genome U34 Set rc_AA955926_at - -
Rat Genome U34 Set rc_AI010722_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21679471 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1366218 - -
RatRef-12 Expression BeadChip ILMN_55010 - -

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