Commd1
Genomic Map
Back To TopAssay Details
| Gene Symbol: Commd1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001115022.1 | NP_001108494.1 | 2 - 3 | 607 | 108 | |
| GenBank mRNA | BC158752.1 | - | 2 - 3 | 594 | 9102854 | 108 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1400002359.rn.1Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Rattus norvegicus
1700
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
Golgi to plasma membrane transport
positive regulation of protein ubiquitination
protein destabilization
negative regulation of NF-kappaB transcription factor activity
regulation of proteasomal ubiquitin-dependent protein catabolic process
plasma membrane to endosome transport
copper ion homeostasis
negative regulation of hypoxia-inducible factor-1alpha signaling pathway
negative regulation of sodium ion transmembrane transport
negative regulation of protein localization to cell surface
copper ion binding
phosphatidylinositol-4,5-bisphosphate binding
phosphatidylinositol-3,4,5-trisphosphate binding
identical protein binding
protein homodimerization activity
phosphatidylinositol-3,4-bisphosphate binding
phosphatidic acid binding
phosphatidylinositol-3,5-bisphosphate binding
Golgi to plasma membrane transport
positive regulation of protein ubiquitination
protein destabilization
negative regulation of NF-kappaB transcription factor activity
regulation of proteasomal ubiquitin-dependent protein catabolic process
plasma membrane to endosome transport
copper ion homeostasis
negative regulation of hypoxia-inducible factor-1alpha signaling pathway
negative regulation of sodium ion transmembrane transport
negative regulation of protein localization to cell surface
copper ion binding
phosphatidylinositol-4,5-bisphosphate binding
phosphatidylinositol-3,4,5-trisphosphate binding
identical protein binding
protein homodimerization activity
phosphatidylinositol-3,4-bisphosphate binding
phosphatidic acid binding
phosphatidylinositol-3,5-bisphosphate binding
MicroArray Probes:
Agilent
Affymetrix
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P041391 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583563 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 98575 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 300556 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 932470 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 360471 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 719505 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 872490 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 898679 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 89250 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 207405 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 133610 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 829059 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 154560 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 54676 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 13222 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 300272 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 305285 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 22489 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 68960 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 677032 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 47207 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 21524 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 504861 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 325140 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 613853 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 13249 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 353442 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 690942 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 76317 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 811032 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 736389 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 771002 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 246415 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 432049 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 941662 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 367279 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 693948 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 199893 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385327 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 729428 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 745391 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 555590 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 175013 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 774643 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 937201 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 728997 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 359375 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 584930 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 843995 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 327091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 593980 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 504350 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 480893 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 500993 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 16181 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 657319 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 382810 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 858769 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 580156 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 573953 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 959481 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 369646 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 487720 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 205134 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 614090 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 843983 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 830953 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 764735 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 212082 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 527595 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 173758 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 341026 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 499549 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 141536 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 161780 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 141625 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 72914 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 46815 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 54492 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 21827 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 152052 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 137687 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 160243 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 81556 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P041391 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P041391 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P041391 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 61929 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 57704 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 18039 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 46386 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 40896 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 63954 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10778717 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10778714 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10778712 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10778711 | - | - |
| Rat Genome 230 2.0 Array | 1371523_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1371523_at | - | - |
| Affymetrix HT Rat Focus Array | 1371523_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1371523_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1400017451.rn.1 | TC1400002359.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1400017450.rn.1 | TC1400002359.rn.1 | RTA TC |
| Rat Expression Set 230 | 1371523_PM_at | - | - |
| Rat Expression Set 230 | 1371523_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10778711 | - | - |
| Rat Genome U34 Set | rc_AA851490_at | - | - |
| Rat Genome U34 Set | rc_AA851490_g_at | - | - |
| Rat Genome U34 Set | rc_AI104261_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21335035 | - | - |
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