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See other NODAL GE Assays ›
Gene Symbol:
Nodal
Gene Name:
nodal growth differentiation factor
Gene Aliases:
-
Chromosome Location:
Chr.20: 31035729 - 31044096 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01433624_m1
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Nodal
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001106394.1 NP_001099864.1 2 - 3 1199 109

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000680.rn.1

Set Membership:

Amplicon length greater than or equal to 101 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Panther Classification:

Molecular Function -

growth factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
gastrulation with mouth forming second
mesoderm formation
trophectodermal cell differentiation
trophectodermal cellular morphogenesis
neural fold formation
liver development
placenta development
embryonic placenta development
maternal placenta development
vasculature development
heart looping
inhibition of neuroepithelial cell differentiation
determination of left/right symmetry
gastrulation
nervous system development
brain development
endoderm development
heart development
positive regulation of cell proliferation
embryonic pattern specification
anterior/posterior axis specification
anterior/posterior pattern specification
regulation of signal transduction
polarity specification of proximal/distal axis
regulation of gastrulation
positive regulation of vascular endothelial growth factor production
negative regulation of cell development
positive regulation of pathway-restricted SMAD protein phosphorylation
cell migration
stem cell population maintenance
positive regulation of cell-cell adhesion
lung development
positive regulation of activin receptor signaling pathway
floor plate morphogenesis
embryonic heart tube development
endodermal cell differentiation
nodal signaling pathway
growth
cell migration involved in gastrulation
regulation of apoptotic process
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
regulation of MAPK cascade
cell fate commitment
negative regulation of cell differentiation
positive regulation of angiogenesis
positive regulation of transcription from RNA polymerase II promoter
axial mesodermal cell fate specification
mesendoderm development
cell development
digestive tract morphogenesis
anatomical structure formation involved in morphogenesis
embryonic cranial skeleton morphogenesis
tissue morphogenesis
formation of anatomical boundary
positive regulation of epithelial cell proliferation
positive regulation of sequence-specific DNA binding transcription factor activity
digestive system development
embryonic process involved in female pregnancy
maternal process involved in parturition
positive regulation of SMAD protein import into nucleus
SMAD protein signal transduction
left lung morphogenesis
negative regulation of androgen receptor signaling pathway
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification
positive regulation of ERK1 and ERK2 cascade
primitive streak formation
transforming growth factor beta receptor signaling pathway involved in primitive streak formation
nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry
negative regulation of trophoblast cell migration
negative regulation of chorionic trophoblast cell proliferation
positive regulation of receptor activity
cytokine activity
transforming growth factor beta receptor binding
growth factor activity
receptor agonist activity
type I activin receptor binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P137941 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 571098 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 918318 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 954765 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 237848 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 865501 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 347556 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 310806 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 134466 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P137941 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P137941 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P137941 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P330890 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 22340 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10830077 - -
Affymetrix Rat Gene 1.0 ST Array 10830078 - -
Affymetrix Rat Gene 1.0 ST Array 10830076 - -
Affymetrix Rat Gene 1.1 ST Array 10830075 - -
Affymetrix Rat Clariom S Assay PSR2000005971.rn.1 TC2000000680.rn.1 RTA TC
Affymetrix Rat Gene 1.0 ST Array 10830075 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21472990 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1351532 - -
Illumina ratRef-12 v1.0 expression beadchip ILMN_2039804 - -

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