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See other PLTP GE Assays ›
Gene Symbol:
Pltp
Gene Name:
phospholipid transfer protein
Gene Aliases:
Bpife
Chromosome Location:
Chr.3: 161304469 - 161322600 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01423343_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Pltp
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001168543.1 NP_001162015.1 7 - 8 865 87
XM_006235535.2 XP_006235597.1 8 - 9 923 87
XM_008762476.1 XP_008760698.1 8 - 9 917 87

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300004761.rn.1

Set Membership:

Amplicon length between 86 and 100 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

lipid metabolic process
biological_process
vitamin E biosynthetic process
positive regulation of cholesterol efflux
sperm motility
high-density lipoprotein particle remodeling
molecular_function
lipid binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P436280 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P436280 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P436280 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P436280 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P488690 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P436280 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.1 ST Array 10842203 - -
Affymetrix Rat Gene 1.1 ST Array 10851670 - -
Rat Genome 230 2.0 Array 1382771_at - -
Rat Genome 230 2.0 Array 1391435_at - -
Rat Genome 230 2.0 Array 1382771_PM_at - -
Rat Genome 230 2.0 Array 1391435_PM_at - -
Affymetrix HT Rat Focus Array 1391435_at - -
Affymetrix HT Rat Focus Array 1382771_PM_at - -
Affymetrix HT Rat Focus Array 1391435_PM_at - -
Affymetrix HT Rat Focus Array 1382771_at - -
Affymetrix Rat Clariom S Assay PSR0300036453.rn.1 TC0300004761.rn.1 RTA TC
Rat Expression Set 230 1382771_at - -
Rat Expression Set 230 1391435_at - -
Rat Expression Set 230 1382771_PM_at - -
Rat Expression Set 230 1391435_PM_at - -
Rat Genome U34 Set rc_AI171583_at - -
Rat Genome U34 Set rc_AI230465_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21866259 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1361441 - -
Illumina ratRef-12 v1.0 expression beadchip ILMN_1376575 - -

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