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See other TRAPPC4 GE Assays ›
Gene Symbol:
Trappc4
Gene Name:
trafficking protein particle complex 4
Gene Aliases:
Sbdn
Chromosome Location:
Chr.8: 48723296 - 48727174 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01422120_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Trappc4
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001003708.1 NP_001003708.1 3 - 4 456 131
XM_008766162.1 XP_008764384.1 3 - 4 674 131
GenBank mRNA AY373378.1 - 3 - 4 456 131
BC098628.1 - 3 - 4 463 7311789 131
FQ220285.1 - 3 - 4 479 131
FQ229310.1 - 3 - 4 486 131

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800002409.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Trappc4

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)

ER to Golgi vesicle-mediated transport
dendrite development
Rab guanyl-nucleotide exchange factor activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P1031390 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 491248 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 859453 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 569456 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 15025 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1031390 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1031390 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P1031390 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P714245 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1031390 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10916786 - -
Affymetrix Rat Gene 1.0 ST Array 10916788 - -
Affymetrix Rat Gene 1.0 ST Array 10916787 - -
Affymetrix Rat Gene 1.0 ST Array 10916790 - -
Affymetrix Rat Gene 1.0 ST Array 10916789 - -
Affymetrix Rat Gene 1.1 ST Array 10916785 - -
Rat Genome 230 2.0 Array 1373907_at - -
Rat Genome 230 2.0 Array 1373907_PM_at - -
Affymetrix HT Rat Focus Array 1373907_at - -
Affymetrix HT Rat Focus Array 1373907_PM_at - -
Affymetrix Rat Clariom S Assay PSR0800019232.rn.1 TC0800002409.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800019231.rn.1 TC0800002409.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800019235.rn.1 TC0800002409.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800019233.rn.1 TC0800002409.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800019234.rn.1 TC0800002409.rn.1 RTA TC
Rat Expression Set 230 1373907_at - -
Rat Expression Set 230 1373907_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10916785 - -
Rat Genome U34 Set rc_AA924765_g_at - -
Rat Genome U34 Set rc_AA924765_at - -
Rat Genome U34 Set rc_AI008536_at - -
Rat Genome U34 Set rc_AI230945_s_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22052971 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1376876 - -

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