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Gene Symbol:
Hmbs
Gene Name:
hydroxymethylbilane synthase
Gene Aliases:
PBG-D, PBGD, URO-S, hemC
Chromosome Location:
Chr.8: 48667278 - 48674670 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01421873_g1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Hmbs
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_013168.2 NP_037300.2 12 - 13 954 76
XM_006242896.1 XP_006242958.1 12 - 13 1040 76
XM_006242897.1 XP_006242959.1 11 - 12 962 76
XM_008766148.1 XP_008764370.1 11 - 12 1124 76
XM_008766149.1 XP_008764371.1 11 - 12 1061 76
GenBank mRNA BC088162.1 - 12 - 13 954 7375228 76
FQ226062.1 - 12 - 13 877 76
FQ230962.1 - 6 - 7 439 76
FQ231091.1 - 12 - 13 939 76
FQ234793.1 - 4 - 5 326 76
FQ234870.1 - 10 - 11 1110 76
X06827.1 - 12 - 13 829 76
Y12006.1 - 12 - 13 824 76

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800002404.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Endogenous Controls Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hmbs

Panther Classification:

Molecular Function -

deaminase

Gene Ontology Categories:

Function(s) Process(es)

response to hypoxia
protoporphyrinogen IX biosynthetic process
response to hormone
response to carbohydrate
response to metal ion
response to zinc ion
response to lead ion
response to organic cyclic compound
peptidyl-pyrromethane cofactor linkage
organ regeneration
response to nutrient levels
response to cobalt ion
response to estradiol
tetrapyrrole biosynthetic process
response to vitamin
response to drug
response to amino acid
astrocyte differentiation
response to methylmercury
cellular response to antibiotic
cellular response to arsenic-containing substance
cellular response to lead ion
cellular response to cytokine stimulus
cellular response to amine stimulus
cellular response to dexamethasone stimulus
hydroxymethylbilane synthase activity
uroporphyrinogen-III synthase activity
protein binding
carboxylic acid binding
amine binding
coenzyme binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P421363 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 874858 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 99172 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 719684 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 192297 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 215005 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P421363 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P421363 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P421363 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P262289 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P421363 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700178371 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 58092 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 62275 - -
Agilent Rat cDNA Microarray (G4105A) 700178371 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10916767 - -
Affymetrix Rat Gene 1.0 ST Array 10916756 - -
Affymetrix Rat Gene 1.0 ST Array 10916759 - -
Affymetrix Rat Gene 1.0 ST Array 10916754 - -
Affymetrix Rat Gene 1.0 ST Array 10916762 - -
Affymetrix Rat Gene 1.0 ST Array 10916757 - -
Affymetrix Rat Gene 1.0 ST Array 10916755 - -
Affymetrix Rat Gene 1.0 ST Array 10916765 - -
Affymetrix Rat Gene 1.0 ST Array 10916763 - -
Affymetrix Rat Gene 1.0 ST Array 10916758 - -
Affymetrix Rat Gene 1.0 ST Array 10916760 - -
Affymetrix Rat Gene 1.0 ST Array 10916761 - -
Affymetrix Rat Gene 1.0 ST Array 10916764 - -
Affymetrix Rat Gene 1.0 ST Array 10916766 - -
Affymetrix Rat Gene 1.1 ST Array 10916753 - -
Rat Genome 230 2.0 Array 1386983_PM_at - -
Rat Genome 230 2.0 Array 1386983_at - -
Affymetrix HT Rat Focus Array 1386983_PM_at - -
Affymetrix HT Rat Focus Array 1386983_at - -
Affymetrix Rat Clariom S Assay PSR0800019163.rn.1 TC0800002404.rn.1 RTA TC
Rat Expression Set 230 1386983_at - -
Rat Expression Set 230 1386983_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10916753 - -
Rat Genome U34 Set X06827_at - -
Rat Genome U34 Set X06827_g_at - -
Rat Genome U34 Set X06827_g_at - -
Rat Genome U34 Set X06827_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21552446 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1353365 - -
RatRef-12 Expression BeadChip ILMN_66660 - -

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