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Gene Symbol:
Hdac8
Gene Name:
histone deacetylase 8
Gene Aliases:
RGD1562895
Chromosome Location:
Chr.X: 72163777 - 72370059 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01419048_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Hdac8
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001126373.2 NP_001119845.2 2 - 3 504 113
XM_006257123.2 XP_006257185.1 2 - 3 512 113
XM_006257124.2 XP_006257186.1 2 - 3 511 113
XM_008773263.1 XP_008771485.1 2 - 3 509 113
GenBank mRNA BC162023.1 - 2 - 3 497 9099275 113
FM086081.1 - 2 - 3 503 113

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00001962.rn.1

Set Membership:

Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
sister chromatid cohesion
histone H3-K9 modification
histone H3 deacetylation
histone H4 deacetylation
regulation of cohesin loading
NAD-dependent histone deacetylase activity (H3-K14 specific)
metal ion binding
NAD-dependent histone deacetylase activity (H3-K9 specific)
NAD-dependent histone deacetylase activity (H4-K16 specific)
NAD-dependent histone deacetylase activity (H3-K18 specific)

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR0X00012489.rn.1 TC0X00001962.rn.1 RTA TC

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